Learning robust cell signalling models from high throughput proteomic data

gan Koch, Mitchell, Broom, Bradley M., Subramanian, Devika
Cyhoeddwyd yn Int J Bioinform Res Appl (2009)

Model averaging strategies for structure learning in Bayesian networks with limited data

gan Broom, Bradley M, Do, Kim-Anh, Subramanian, Devika
Cyhoeddwyd 2012

Combining enzalutamide with PARP inhibitors: Pharmaceutically induced BRCAness

gan Thompson, Timothy C., Li, Likun, Broom, Bradley M.
Cyhoeddwyd yn Oncotarget (2017)

PathwaysWeb: a gene pathways API with directional interactions, expanded gene ontology, and versioning

gan Melott, James M., Weinstein, John N., Broom, Bradley M.
Cyhoeddwyd yn Bioinformatics (2016)

Gene expression meta-analysis supports existence of molecular apocrine breast cancer with a role for androgen receptor and implies interactions with ErbB family

gan Sanga, Sandeep, Broom, Bradley M, Cristini, Vittorio, Edgerton, Mary E
Cyhoeddwyd 2009

iBAG: integrative Bayesian analysis of high-dimensional multiplatform genomics data

gan Wang, Wenting, Baladandayuthapani, Veerabhadran, Morris, Jeffrey S., Broom, Bradley M., Manyam, Ganiraju, Do, Kim-Anh
Cyhoeddwyd 2013

Bagged gene shaving for the robust clustering of high-throughput data

gan Broom, Bradley M., Sulman, Erik P., Do, Kim-Anh, Edgerton, Mary E., Aldape, Kenneth D.
Cyhoeddwyd 2010

Back to the Colorectal Cancer Consensus Molecular Subtype Future

gan Menter, David G., Davis, Jennifer S., Broom, Bradley M., Overman, Michael J., Morris, Jeffrey, Kopetz, Scott
Cyhoeddwyd yn Curr Gastroenterol Rep (2019)

Bayesian ensemble methods for survival prediction in gene expression data

gan Bonato, Vinicius, Baladandayuthapani, Veerabhadran, Broom, Bradley M., Sulman, Erik P., Aldape, Kenneth D., Do, Kim-Anh
Cyhoeddwyd 2011

Interactive Clustered Heat Map Builder: An easy web-based tool for creating sophisticated clustered heat maps

gan Ryan, Michael C., Stucky, Mark, Wakefield, Chris, Melott, James M., Akbani, Rehan, Weinstein, John N., Broom, Bradley M.
Cyhoeddwyd yn F1000Res (2020)

FuncPEP: A Database of Functional Peptides Encoded by Non-Coding RNAs

gan Dragomir, Mihnea P., Manyam, Ganiraju C., Ott, Leonie Florence, Berland, Léa, Knutsen, Erik, Ivan, Cristina, Lipovich, Leonard, Broom, Bradley M., Calin, George A.
Cyhoeddwyd yn Noncoding RNA (2020)

A Galaxy implementation of next-generation clustered heat maps for interactive exploration of molecular profiling data

gan Broom, Bradley M., Ryan, Michael, Brown, Robert, Ikeda, Futa, Stucky, Mark, Kane, David W., Melott, James, Wakefield, Chris, Casasent, Tod D., Akbani, Rehan, Weinstein, John N.
Cyhoeddwyd yn Cancer Res (2017)

Downregulation of 15-hydroxyprostaglandin dehydrogenase during acquired tamoxifen resistance and association with poor prognosis in ERα-positive breast cancer

gan Volpato, Milene, Cummings, Michele, Shaaban, Abeer M., Abderrahman, Balkees, Hull, Mark A., Maximov, Philipp Y., Broom, Bradley M., Hoppe, Reiner, Fan, Ping, Brauch, Hiltrud, Jordan, V. Craig, Speirs, Valerie
Cyhoeddwyd yn Explor Target Antitumor Ther (2020)

TCPA: a resource for cancer functional proteomics data

gan Li, Jun, Lu, Yiling, Akbani, Rehan, Ju, Zhenlin, Roebuck, Paul L, Liu, Wenbin, Yang, Ji-Yeon, Broom, Bradley M, Verhaak, Roeland G W, Kane, David W, Wakefield, Chris, Weinstein, John N, Mills, Gordon B, Liang, Han
Cyhoeddwyd 2013

Selective Genomic Copy Number Imbalances and Probability of Recurrence in Early-Stage Breast Cancer

gan Thompson, Patricia A., Brewster, Abenaa M., Kim-Anh, Do, Baladandayuthapani, Veerabhadran, Broom, Bradley M., Edgerton, Mary E., Hahn, Karin M., Murray, James L., Sahin, Aysegul, Tsavachidis, Spyros, Wang, Yuker, Zhang, Li, Hortobagyi, Gabriel N., Mills, Gordon B., Bondy, Melissa L.
Cyhoeddwyd 2011

NSD1 Inactivation and SETD2 Mutation Drive a Convergence toward Loss of Function of H3K36 Writers in Clear Cell Renal Cell Carcinomas

gan Su, Xiaoping, Zhang, Jianping, Mouawad, Roger, Compérat, Eva, Rouprêt, Morgan, Allanic, Frederick, Parra, Jérôme, Bitker, Marc-Olivier, Thompson, Erika J., Gowrishankar, Banumathy, Houldsworth, Jane, Weinstein, John N., Tost, Jorg, Broom, Bradley M., Khayat, David, Spano, Jean-Philippe, Tannir, Nizar M., Malouf, Gabriel G.
Cyhoeddwyd yn Cancer Res (2017)

The Structure-Function Relationship of Angular Estrogens and Estrogen Receptor Alpha to Initiate Estrogen-Induced Apoptosis in Breast Cancer Cells

gan Maximov, Philipp Y., Abderrahman, Balkees, Hawsawi, Yousef M., Chen, Yue, Foulds, Charles E., Jain, Antrix, Malovannaya, Anna, Fan, Ping, Curpan, Ramona F., Han, Ross, Fanning, Sean W., Broom, Bradley M., Quintana Rincon, Daniela M., Greenland, Jeffery A., Greene, Geoffrey L., Jordan, V. Craig
Cyhoeddwyd yn Mol Pharmacol (2020)

Modeling of Patient Derived Xenografts in Colorectal Cancer

gan Katsiampoura, Anastasia, Raghav, Kanwal, Jiang, Zhi-Qin, Menter, David G., Varkaris, Andreas, Morelli, Maria P., Manuel, Shanequa, Wu, Ji, Sorokin, Alexey V., Rizi, Bahar Salimian, Bristow, Christopher, Tian, Feng, Airhart, Susan, Cheng, Mingshan, Broom, Bradley M., Morris, Jeffrey, Overman, Michael J., Powis, Garth, Kopetz, Scott
Cyhoeddwyd yn Mol Cancer Ther (2017)

Inhibition of mTORC1/2 overcomes resistance to MAPK pathway inhibitors mediated by PGC1α and Oxidative Phosphorylation in melanoma

gan Gopal, Y.N. Vashisht, Rizos, Helen, Chen, Guo, Deng, Wanleng, Frederick, Dennie T., Cooper, Zachary A., Scolyer, Richard A, Pupo, Gulietta, Komurov, Kakajan, Sehgal, Vasudha, Zhang, Jiexin, Patel, Lalit, Pereira, Cristiano G., Broom, Bradley M., Mills, Gordon B., Ram, Prahlad, Smith, Paul D., Wargo, Jennifer A., Long, Georgina V., Davies, Michael A.
Cyhoeddwyd yn Cancer Res (2014)

Targeting the MYCN-PARP-DNA Damage Response Pathway in Neuroendocrine Prostate Cancer

gan Zhang, Wei, Liu, Bo, Wu, Wenhui, Li, Likun, Broom, Bradley M., Basourakos, Spyridon P., Korentzelos, Dimitrios, Luan, Yang, Wang, Jianxiang, Yang, Guang, Park, Sanghee, Azad, Abul Kalam, Cao, Xuhong, Kim, Jeri, Corn, Paul G., Logothetis, Christopher J., Aparicio, Ana M., Chinnaiyan, Arul M., Navone, Nora, Troncoso, Patricia, Thompson, Timothy C.
Cyhoeddwyd yn Clin Cancer Res (2017)