Learning robust cell signalling models from high throughput proteomic data

Por Koch, Mitchell, Broom, Bradley M., Subramanian, Devika
Publicado no Int J Bioinform Res Appl (2009)

Model averaging strategies for structure learning in Bayesian networks with limited data

Por Broom, Bradley M, Do, Kim-Anh, Subramanian, Devika
Publicado em 2012

Combining enzalutamide with PARP inhibitors: Pharmaceutically induced BRCAness

Por Thompson, Timothy C., Li, Likun, Broom, Bradley M.
Publicado no Oncotarget (2017)

PathwaysWeb: a gene pathways API with directional interactions, expanded gene ontology, and versioning

Por Melott, James M., Weinstein, John N., Broom, Bradley M.
Publicado no Bioinformatics (2016)

Gene expression meta-analysis supports existence of molecular apocrine breast cancer with a role for androgen receptor and implies interactions with ErbB family

Por Sanga, Sandeep, Broom, Bradley M, Cristini, Vittorio, Edgerton, Mary E
Publicado em 2009

iBAG: integrative Bayesian analysis of high-dimensional multiplatform genomics data

Por Wang, Wenting, Baladandayuthapani, Veerabhadran, Morris, Jeffrey S., Broom, Bradley M., Manyam, Ganiraju, Do, Kim-Anh
Publicado em 2013

Bagged gene shaving for the robust clustering of high-throughput data

Por Broom, Bradley M., Sulman, Erik P., Do, Kim-Anh, Edgerton, Mary E., Aldape, Kenneth D.
Publicado em 2010

Back to the Colorectal Cancer Consensus Molecular Subtype Future

Por Menter, David G., Davis, Jennifer S., Broom, Bradley M., Overman, Michael J., Morris, Jeffrey, Kopetz, Scott
Publicado no Curr Gastroenterol Rep (2019)

Bayesian ensemble methods for survival prediction in gene expression data

Por Bonato, Vinicius, Baladandayuthapani, Veerabhadran, Broom, Bradley M., Sulman, Erik P., Aldape, Kenneth D., Do, Kim-Anh
Publicado em 2011

Interactive Clustered Heat Map Builder: An easy web-based tool for creating sophisticated clustered heat maps

Por Ryan, Michael C., Stucky, Mark, Wakefield, Chris, Melott, James M., Akbani, Rehan, Weinstein, John N., Broom, Bradley M.
Publicado no F1000Res (2020)

FuncPEP: A Database of Functional Peptides Encoded by Non-Coding RNAs

Por Dragomir, Mihnea P., Manyam, Ganiraju C., Ott, Leonie Florence, Berland, Léa, Knutsen, Erik, Ivan, Cristina, Lipovich, Leonard, Broom, Bradley M., Calin, George A.
Publicado no Noncoding RNA (2020)

A Galaxy implementation of next-generation clustered heat maps for interactive exploration of molecular profiling data

Por Broom, Bradley M., Ryan, Michael, Brown, Robert, Ikeda, Futa, Stucky, Mark, Kane, David W., Melott, James, Wakefield, Chris, Casasent, Tod D., Akbani, Rehan, Weinstein, John N.
Publicado no Cancer Res (2017)

Downregulation of 15-hydroxyprostaglandin dehydrogenase during acquired tamoxifen resistance and association with poor prognosis in ERα-positive breast cancer

Por Volpato, Milene, Cummings, Michele, Shaaban, Abeer M., Abderrahman, Balkees, Hull, Mark A., Maximov, Philipp Y., Broom, Bradley M., Hoppe, Reiner, Fan, Ping, Brauch, Hiltrud, Jordan, V. Craig, Speirs, Valerie
Publicado no Explor Target Antitumor Ther (2020)

TCPA: a resource for cancer functional proteomics data

Por Li, Jun, Lu, Yiling, Akbani, Rehan, Ju, Zhenlin, Roebuck, Paul L, Liu, Wenbin, Yang, Ji-Yeon, Broom, Bradley M, Verhaak, Roeland G W, Kane, David W, Wakefield, Chris, Weinstein, John N, Mills, Gordon B, Liang, Han
Publicado em 2013

Selective Genomic Copy Number Imbalances and Probability of Recurrence in Early-Stage Breast Cancer

Por Thompson, Patricia A., Brewster, Abenaa M., Kim-Anh, Do, Baladandayuthapani, Veerabhadran, Broom, Bradley M., Edgerton, Mary E., Hahn, Karin M., Murray, James L., Sahin, Aysegul, Tsavachidis, Spyros, Wang, Yuker, Zhang, Li, Hortobagyi, Gabriel N., Mills, Gordon B., Bondy, Melissa L.
Publicado em 2011

NSD1 Inactivation and SETD2 Mutation Drive a Convergence toward Loss of Function of H3K36 Writers in Clear Cell Renal Cell Carcinomas

Por Su, Xiaoping, Zhang, Jianping, Mouawad, Roger, Compérat, Eva, Rouprêt, Morgan, Allanic, Frederick, Parra, Jérôme, Bitker, Marc-Olivier, Thompson, Erika J., Gowrishankar, Banumathy, Houldsworth, Jane, Weinstein, John N., Tost, Jorg, Broom, Bradley M., Khayat, David, Spano, Jean-Philippe, Tannir, Nizar M., Malouf, Gabriel G.
Publicado no Cancer Res (2017)

The Structure-Function Relationship of Angular Estrogens and Estrogen Receptor Alpha to Initiate Estrogen-Induced Apoptosis in Breast Cancer Cells

Por Maximov, Philipp Y., Abderrahman, Balkees, Hawsawi, Yousef M., Chen, Yue, Foulds, Charles E., Jain, Antrix, Malovannaya, Anna, Fan, Ping, Curpan, Ramona F., Han, Ross, Fanning, Sean W., Broom, Bradley M., Quintana Rincon, Daniela M., Greenland, Jeffery A., Greene, Geoffrey L., Jordan, V. Craig
Publicado no Mol Pharmacol (2020)

Modeling of Patient Derived Xenografts in Colorectal Cancer

Por Katsiampoura, Anastasia, Raghav, Kanwal, Jiang, Zhi-Qin, Menter, David G., Varkaris, Andreas, Morelli, Maria P., Manuel, Shanequa, Wu, Ji, Sorokin, Alexey V., Rizi, Bahar Salimian, Bristow, Christopher, Tian, Feng, Airhart, Susan, Cheng, Mingshan, Broom, Bradley M., Morris, Jeffrey, Overman, Michael J., Powis, Garth, Kopetz, Scott
Publicado no Mol Cancer Ther (2017)

Inhibition of mTORC1/2 overcomes resistance to MAPK pathway inhibitors mediated by PGC1α and Oxidative Phosphorylation in melanoma

Por Gopal, Y.N. Vashisht, Rizos, Helen, Chen, Guo, Deng, Wanleng, Frederick, Dennie T., Cooper, Zachary A., Scolyer, Richard A, Pupo, Gulietta, Komurov, Kakajan, Sehgal, Vasudha, Zhang, Jiexin, Patel, Lalit, Pereira, Cristiano G., Broom, Bradley M., Mills, Gordon B., Ram, Prahlad, Smith, Paul D., Wargo, Jennifer A., Long, Georgina V., Davies, Michael A.
Publicado no Cancer Res (2014)

Targeting the MYCN-PARP-DNA Damage Response Pathway in Neuroendocrine Prostate Cancer

Por Zhang, Wei, Liu, Bo, Wu, Wenhui, Li, Likun, Broom, Bradley M., Basourakos, Spyridon P., Korentzelos, Dimitrios, Luan, Yang, Wang, Jianxiang, Yang, Guang, Park, Sanghee, Azad, Abul Kalam, Cao, Xuhong, Kim, Jeri, Corn, Paul G., Logothetis, Christopher J., Aparicio, Ana M., Chinnaiyan, Arul M., Navone, Nora, Troncoso, Patricia, Thompson, Timothy C.
Publicado no Clin Cancer Res (2017)