PathwaysWeb: a gene pathways API with directional interactions, expanded gene ontology, and versioning

Tekijä Melott, James M., Weinstein, John N., Broom, Bradley M.
Julkaisussa Bioinformatics (2016)

TCGASpliceSeq a compendium of alternative mRNA splicing in cancer

Tekijä Ryan, Michael, Wong, Wing Chung, Brown, Robert, Akbani, Rehan, Su, Xiaoping, Broom, Bradley, Melott, James, Weinstein, John
Julkaisussa Nucleic Acids Res (2016)

Interactive Clustered Heat Map Builder: An easy web-based tool for creating sophisticated clustered heat maps

Tekijä Ryan, Michael C., Stucky, Mark, Wakefield, Chris, Melott, James M., Akbani, Rehan, Weinstein, John N., Broom, Bradley M.
Julkaisussa F1000Res (2020)

SoS Notebook: an interactive multi-language data analysis environment

Tekijä Peng, Bo, Wang, Gao, Ma, Jun, Leong, Man Chong, Wakefield, Chris, Melott, James, Chiu, Yulun, Du, Di, Weinstein, John N
Julkaisussa Bioinformatics (2018)

A Galaxy implementation of next-generation clustered heat maps for interactive exploration of molecular profiling data

Tekijä Broom, Bradley M., Ryan, Michael, Brown, Robert, Ikeda, Futa, Stucky, Mark, Kane, David W., Melott, James, Wakefield, Chris, Casasent, Tod D., Akbani, Rehan, Weinstein, John N.
Julkaisussa Cancer Res (2017)

TransVar: a trans-level variant annotator for precision genomics

Tekijä Zhou, Wanding, Chen, Tenghui, Chong, Zechen, Rohrdanz, Mary A., Melott, James M., Wakefield, Chris, Zeng, Jia, Weinstein, John N., Meric-Bernstam, Funda, Mills, Gordon B., Chen, Ken
Julkaisussa Nat Methods (2015)