ProbKnot: Fast prediction of RNA secondary structure including pseudoknots

di Bellaousov, Stanislav, Mathews, David H.
Pubblicazione 2010

RNAstructure: web servers for RNA secondary structure prediction and analysis

di Bellaousov, Stanislav, Reuter, Jessica S., Seetin, Matthew G., Mathews, David H.
Pubblicazione 2013

Accelerated RNA secondary structure design using preselected sequences for helices and loops

di Bellaousov, Stanislav, Kayedkhordeh, Mohammad, Peterson, Raymond J., Mathews, David H.
Pubblicato in RNA (2018)

Accurate SHAPE-directed RNA secondary structure modeling, including pseudoknots

di Hajdin, Christine E., Bellaousov, Stanislav, Huggins, Wayne, Leonard, Christopher W., Mathews, David H., Weeks, Kevin M.
Pubblicazione 2013

Structure-Function Model for Kissing Loop Interactions That Initiate Dimerization of Ty1 RNA

di Gamache, Eric R., Doh, Jung H., Ritz, Justin, Laederach, Alain, Bellaousov, Stanislav, Mathews, David H., Curcio, M. Joan
Pubblicato in Viruses (2017)

Nuclear Magnetic Resonance-Assisted Prediction of Secondary Structure for RNA: Incorporation of Direction-Dependent Chemical Shift Constraints

di Chen, Jonathan L., Bellaousov, Stanislav, Tubbs, Jason D., Kennedy, Scott D., Lopez, Michael J., Mathews, David H., Turner, Douglas H.
Pubblicato in Biochemistry (2015)

Transcriptional Regulation on Aneuploid Chromosomes in Diverse Candida albicans Mutants

di Tucker, Christopher, Bhattacharya, Soumyaroop, Wakabayashi, Hironao, Bellaousov, Stanislav, Kravets, Anatoliy, Welle, Stephen L., Myers, Jason, Hayes, Jeffrey J., Bulger, Michael, Rustchenko, Elena
Pubblicato in Sci Rep (2018)

Author Correction: Transcriptional Regulation on Aneuploid Chromosomes in Diverse Candida albicans Mutants

di Tucker, Christopher, Bhattacharya, Soumyaroop, Wakabayashi, Hironao, Bellaousov, Stanislav, Kravets, Anatoliy, Welle, Stephen L., Myers, Jason, Hayes, Jeffrey J., Bulger, Michael, Rustchenko, Elena
Pubblicato in Sci Rep (2019)

mRNAs and lncRNAs intrinsically form secondary structures with short end-to-end distances

di Lai, Wan-Jung C., Kayedkhordeh, Mohammad, Cornell, Erica V., Farah, Elie, Bellaousov, Stanislav, Rietmeijer, Robert, Salsi, Enea, Mathews, David H., Ermolenko, Dmitri N.
Pubblicato in Nat Commun (2018)

Pyrvinium pamoate changes alternative splicing of the serotonin receptor 2C by influencing its RNA structure

di Shen, Manli, Bellaousov, Stanislav, Hiller, Michael, de La Grange, Pierre, Creamer, Trevor P., Malina, Orit, Sperling, Ruth, Mathews, David H., Stoilov, Peter, Stamm, Stefan
Pubblicazione 2013

O-GlcNAc regulates gene expression by controlling detained intron splicing

di Tan, Zhi-Wei, Fei, George, Paulo, Joao A, Bellaousov, Stanislav, Martin, Sara E S, Duveau, Damien Y, Thomas, Craig J, Gygi, Steven P, Boutz, Paul L, Walker, Suzanne
Pubblicato in Nucleic Acids Res (2020)

Sharing and archiving nucleic acid structure mapping data

di Rocca-Serra, Philippe, Bellaousov, Stanislav, Birmingham, Amanda, Chen, Chunxia, Cordero, Pablo, Das, Rhiju, Davis-Neulander, Lauren, Duncan, Caia D.S., Halvorsen, Matthew, Knight, Rob, Leontis, Neocles B., Mathews, David H., Ritz, Justin, Stombaugh, Jesse, Weeks, Kevin M., Zirbel, Craig L., Laederach, Alain
Pubblicazione 2011