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ProbKnot: Fast prediction of RNA secondary structure including pseudoknots
It is a significant challenge to predict RNA secondary structures including pseudoknots. Here, a new algorithm capable of predicting pseudoknots of any topology, ProbKnot, is reported. ProbKnot assembles maximum expected accuracy structures from computed base-pairing probabilities in O(N(2)) time, w...
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| Main Authors: | , |
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| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
Cold Spring Harbor Laboratory Press
2010
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| Assuntos: | |
| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC2941096/ https://ncbi.nlm.nih.gov/pubmed/20699301 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1261/rna.2125310 |
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