Systematic genome-wide annotation of spliceosomal proteins reveals differential gene family expansion

Por Barbosa-Morais, Nuno L., Carmo-Fonseca, Maria, Aparício, Samuel
Publicado em 2006

Genome-wide identification of functionally distinct subsets of cellular mRNAs associated with two nucleocytoplasmic-shuttling mammalian splicing factors

Por Gama-Carvalho, Margarida, Barbosa-Morais, Nuno L, Brodsky, Alexander S, Silver, Pamela A, Carmo-Fonseca, Maria
Publicado em 2006

Statistical issues in the analysis of Illumina data

Por Dunning, Mark J, Barbosa-Morais, Nuno L, Lynch, Andy G, Tavaré, Simon, Ritchie, Matthew E
Publicado em 2008

Spike-in validation of an Illumina-specific variance-stabilizing transformation

Por Dunning, Mark J, Ritchie, Matthew E, Barbosa-Morais, Nuno L, Tavaré, Simon, Lynch, Andy G
Publicado em 2008

Expression microarray reproducibility is improved by optimising purification steps in RNA amplification and labelling

Por Naderi, Ali, Ahmed, Ahmed A, Barbosa-Morais, Nuno L, Aparicio, Samuel, Brenton, James D, Caldas, Carlos
Publicado em 2004

ASD: a bioinformatics resource on alternative splicing

Por Stamm, Stefan, Riethoven, Jean-Jack, Le Texier, Vincent, Gopalakrishnan, Chellappa, Kumanduri, Vasudev, Tang, Yesheng, Barbosa-Morais, Nuno L., Thanaraj, Thangavel Alphonse
Publicado em 2006

New androgen receptor genomic targets show an interaction with the ETS1 transcription factor

Por Massie, Charles E, Adryan, Boris, Barbosa-Morais, Nuno L, Lynch, Andy G, Tran, Maxine G, Neal, David E, Mills, Ian G
Publicado em 2007

A consensus prognostic gene expression classifier for ER positive breast cancer

Por Teschendorff, Andrew E, Naderi, Ali, Barbosa-Morais, Nuno L, Pinder, Sarah E, Ellis, Ian O, Aparicio, Sam, Brenton, James D, Caldas, Carlos
Publicado em 2006

A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data

Por Barbosa-Morais, Nuno L., Dunning, Mark J., Samarajiwa, Shamith A., Darot, Jeremy F. J., Ritchie, Matthew E., Lynch, Andy G., Tavaré, Simon
Publicado em 2010

Tissue-specific splicing factor gene expression signatures

Por Grosso, Ana Rita, Gomes, Anita Q., Barbosa-Morais, Nuno L., Caldeira, Sandra, Thorne, Natalie P., Grech, Godfrey, von Lindern, Marieke, Carmo-Fonseca, Maria
Publicado em 2008

Widespread intron retention in mammals functionally tunes transcriptomes

Por Braunschweig, Ulrich, Barbosa-Morais, Nuno L., Pan, Qun, Nachman, Emil N., Alipanahi, Babak, Gonatopoulos-Pournatzis, Thomas, Frey, Brendan, Irimia, Manuel, Blencowe, Benjamin J.
Publicado em 2014

Species-specific transcription in mice carrying human chromosome 21

Por Wilson, Michael D., Barbosa-Morais, Nuno L., Schmidt, Dominic, Conboy, Caitlin M., Vanes, Lesley, Tybulewicz, Victor L. J., Fisher, Elizabeth M. C., Tavaré, Simon, Odom, Duncan T.
Publicado em 2008

MMASS: an optimized array-based method for assessing CpG island methylation

Por Ibrahim, Ashraf E. K., Thorne, Natalie P., Baird, Katie, Barbosa-Morais, Nuno L., Tavaré, Simon, Collins, V. Peter, Wyllie, Andrew H., Arends, Mark J., Brenton, James D.
Publicado em 2006

Cell Cycle Genes Are the Evolutionarily Conserved Targets of the E2F4 Transcription Factor

Por Conboy, Caitlin M., Spyrou, Christiana, Thorne, Natalie P., Wade, Elizabeth J., Barbosa-Morais, Nuno L., Wilson, Michael D., Bhattacharjee, Arindam, Young, Richard A., Tavaré, Simon, Lees, Jacqueline A., Odom, Duncan T.
Publicado em 2007

Association of single-nucleotide polymorphisms in the cell cycle genes with breast cancer in the British population

Por Driver, Kristy E., Song, Honglin, Lesueur, Fabienne, Ahmed, Shahana, Barbosa-Morais, Nuno L., Tyrer, Jonathan P., Ponder, Bruce A.J., Easton, Douglas F., Pharoah, Paul D.P., Dunning, Alison M.
Publicado em 2008

Trypanosoma brucei histone H1 inhibits RNA polymerase I transcription and is important for parasite fitness in vivo

Por Pena, Ana C, Pimentel, Mafalda R, Manso, Helena, Vaz-Drago, Rita, Pinto-Neves, Daniel, Aresta-Branco, Francisco, Rijo-Ferreira, Filipa, Guegan, Fabien, Pedro Coelho, Luis, Carmo-Fonseca, Maria, Barbosa-Morais, Nuno L, Figueiredo, Luisa M
Publicado no Mol Microbiol (2014)

MicroRNA expression profiling of human breast cancer identifies new markers of tumor subtype

Por Blenkiron, Cherie, Goldstein, Leonard D, Thorne, Natalie P, Spiteri, Inmaculada, Chin, Suet-Feung, Dunning, Mark J, Barbosa-Morais, Nuno L, Teschendorff, Andrew E, Green, Andrew R, Ellis, Ian O, Tavaré, Simon, Caldas, Carlos, Miska, Eric A
Publicado em 2007

Latent Regulatory Potential of Human-Specific Repetitive Elements

Por Ward, Michelle C., Wilson, Michael D., Barbosa-Morais, Nuno L., Schmidt, Dominic, Stark, Rory, Pan, Qun, Schwalie, Petra C., Menon, Suraj, Lukk, Margus, Watt, Stephen, Thybert, David, Kutter, Claudia, Kirschner, Kristina, Flicek, Paul, Blencowe, Benjamin J., Odom, Duncan T.
Publicado em 2013

High-resolution aCGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer

Por Chin, Suet F, Teschendorff, Andrew E, Marioni, John C, Wang, Yanzhong, Barbosa-Morais, Nuno L, Thorne, Natalie P, Costa, Jose L, Pinder, Sarah E, van de Wiel, Mark A, Green, Andrew R, Ellis, Ian O, Porter, Peggy L, Tavaré, Simon, Brenton, James D, Ylstra, Bauke, Caldas, Carlos
Publicado em 2007

MBNL proteins repress embryonic stem cell-specific alternative splicing and reprogramming

Por Han, Hong, Irimia, Manuel, Ross, P. Joel, Sung, Hoon-Ki, Alipanahi, Babak, David, Laurent, Golipour, Azadeh, Gabut, Mathieu, Michael, Iacovos P., Nachman, Emil N., Wang, Eric, Trcka, Dan, Thompson, Tadeo, O’Hanlon, Dave, Slobodeniuc, Valentina, Barbosa-Morais, Nuno L., Burge, Christopher B., Moffat, Jason, Frey, Brendan J., Nagy, Andras, Ellis, James, Wrana, Jeffrey L., Blencowe, Benjamin J.
Publicado em 2013