Genes Encoding Microbial Acyl Coenzyme A Binding Protein/Diazepam-Binding Inhibitor Orthologs Are Rare in the Human Gut Microbiome and Show No Links to Obesity

od Thomas, Andrew Maltez, Asnicar, Francesco, Kroemer, Guido, Segata, Nicola
Wydane w Appl Environ Microbiol (2021)

Compact graphical representation of phylogenetic data and metadata with GraPhlAn

od Asnicar, Francesco, Weingart, George, Tickle, Timothy L., Huttenhower, Curtis, Segata, Nicola
Wydane w PeerJ (2015)

Profiling microbial strains in urban environments using metagenomic sequencing data

od Zolfo, Moreno, Asnicar, Francesco, Manghi, Paolo, Pasolli, Edoardo, Tett, Adrian, Segata, Nicola
Wydane w Biol Direct (2018)

Genomic and metagenomic insights into the microbial community of a thermal spring

od Pedron, Renato, Esposito, Alfonso, Bianconi, Irene, Pasolli, Edoardo, Tett, Adrian, Asnicar, Francesco, Cristofolini, Mario, Segata, Nicola, Jousson, Olivier
Wydane w Microbiome (2019)

Integrating Metagenomic Information into Personalized Nutrition Tools: The PREDICT I Study (P20-005-19)

od Spector, Tim, Berry, Sarah, Valdes, Ana, Drew, David, Chan, Andrew, Franks, Paul, Asnicar, Francesco, Segata, Nicola, Davies, Richard
Wydane w Curr Dev Nutr (2019)

Draft Genome Sequence of the Planktic Cyanobacterium Tychonema bourrellyi, Isolated from Alpine Lentic Freshwater

od Pinto, Federica, Tett, Adrian, Armanini, Federica, Asnicar, Francesco, Boscaini, Adriano, Pasolli, Edoardo, Zolfo, Moreno, Donati, Claudio, Salmaso, Nico, Segata, Nicola
Wydane w Genome Announc (2017)

Draft Genome Sequences of Novel Pseudomonas, Flavobacterium, and Sediminibacterium Species Strains from a Freshwater Ecosystem

od Pinto, Federica, Tett, Adrian, Armanini, Federica, Asnicar, Francesco, Boscaini, Adriano, Pasolli, Edoardo, Zolfo, Moreno, Donati, Claudio, Salmaso, Nico, Segata, Nicola
Wydane w Genome Announc (2018)

Correction for Pinto et al., “Draft Genome Sequences of Novel Pseudomonas, Flavobacterium, and Sediminibacterium Strains from a Freshwater Ecosystem”

od Pinto, Federica, Tett, Adrian, Armanini, Federica, Asnicar, Francesco, Boscaini, Adriano, Pasolli, Edoardo, Zolfo, Moreno, Donati, Claudio, Salmaso, Nico, Segata, Nicola
Wydane w Genome Announc (2018)

Discovering Causal Relationships in Grapevine Expression Data to Expand Gene Networks. A Case Study: Four Networks Related to Climate Change

od Malacarne, Giulia, Pilati, Stefania, Valentini, Samuel, Asnicar, Francesco, Moretto, Marco, Sonego, Paolo, Masera, Luca, Cavecchia, Valter, Blanzieri, Enrico, Moser, Claudio
Wydane w Front Plant Sci (2018)

Studying Vertical Microbiome Transmission from Mothers to Infants by Strain-Level Metagenomic Profiling

od Asnicar, Francesco, Manara, Serena, Zolfo, Moreno, Truong, Duy Tin, Scholz, Matthias, Armanini, Federica, Ferretti, Pamela, Gorfer, Valentina, Pedrotti, Anna, Tett, Adrian, Segata, Nicola
Wydane w mSystems (2017)

Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1000 novel species

od Manara, Serena, Asnicar, Francesco, Beghini, Francesco, Bazzani, Davide, Cumbo, Fabio, Zolfo, Moreno, Nigro, Eleonora, Karcher, Nicolai, Manghi, Paolo, Metzger, Marisa Isabell, Pasolli, Edoardo, Segata, Nicola
Wydane w Genome Biol (2019)

Impact of Postprandial Lipemia and Glycemia on Inflammatory Factors in over 1000 Individuals in the US and UK: Insights from the PREDICT 1 and InterCardio Studies

od Berry, Sarah, Mazidi, Mohsen, Franks, Paul, Valdes, Ana, Sattar, Naveed, Wolf, Jonathan, Hadjigeorgiou, George, Drew, David, Chan, Andrew, Segata, Nicola, Asnicar, Francesco, Spector, Tim, Hall, Wendy
Wydane w Curr Dev Nutr (2020)

Gut microbiome diversity and composition is associated with hypertension in women

od Louca, Panayiotis, Nogal, Ana, Wells, Philippa M., Asnicar, Francesco, Wolf, Jonathan, Steves, Claire J., Spector, Tim D., Segata, Nicola, Berry, Sarah E., Valdes, Ana M., Menni, Cristina
Wydane w J Hypertens (2021)

Influence of Gut Microbial Communities on Fasting and Postprandial Lipids and Circulating Metabolites: The PREDICT 1 Study

od Berry, Sarah, Ordovas, Jose, Asnicar, Francesco, Valdes, Ana, Franks, Paul, Wolf, Jonathan, Hadjigeorgiou, George, Drew, David, Roy, Caroline Le, Leeming, Emily, Nguyen, Long, Chan, Andrew, Spector, Tim, Segata, Nicola
Wydane w Curr Dev Nutr (2020)

Microbiome Signatures of Nutrients, Foods and Dietary Patterns: Potential for Personalized Nutrition from The PREDICT 1 Study

od Spector, Tim, Asnicar, Francesco, Berry, Sarah, Valdes, Ana, Franks, Paul, Wolf, Jonathan, Hadjigeorgiou, George, Roy, Caroline Le, Leeming, Emily, Drew, David, Nguyen, Long, Mazidi, Mohsen, Chan, Andrew, Segata, Nicola
Wydane w Curr Dev Nutr (2020)

Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis

od Tett, Adrian, Pasolli, Edoardo, Farina, Stefania, Truong, Duy Tin, Asnicar, Francesco, Zolfo, Moreno, Beghini, Francesco, Armanini, Federica, Jousson, Olivier, De Sanctis, Veronica, Bertorelli, Roberto, Girolomoni, Giampiero, Cristofolini, Mario, Segata, Nicola
Wydane w NPJ Biofilms Microbiomes (2017)

Whole-genome epidemiology, characterisation, and phylogenetic reconstruction of Staphylococcus aureus strains in a paediatric hospital

od Manara, Serena, Pasolli, Edoardo, Dolce, Daniela, Ravenni, Novella, Campana, Silvia, Armanini, Federica, Asnicar, Francesco, Mengoni, Alessio, Galli, Luisa, Montagnani, Carlotta, Venturini, Elisabetta, Rota-Stabelli, Omar, Grandi, Guido, Taccetti, Giovanni, Segata, Nicola
Wydane w Genome Med (2018)

High intake of vegetables is linked to lower white blood cell profile and the effect is mediated by the gut microbiome

od Menni, Cristina, Louca, Panayiotis, Berry, Sarah E., Vijay, Amrita, Astbury, Stuart, Leeming, Emily R., Gibson, Rachel, Asnicar, Francesco, Piccinno, Gianmarco, Wolf, Jonathan, Davies, Richard, Mangino, Massimo, Segata, Nicola, Spector, Tim D., Valdes, Ana M.
Wydane w BMC Med (2021)

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0

od Asnicar, Francesco, Thomas, Andrew Maltez, Beghini, Francesco, Mengoni, Claudia, Manara, Serena, Manghi, Paolo, Zhu, Qiyun, Bolzan, Mattia, Cumbo, Fabio, May, Uyen, Sanders, Jon G., Zolfo, Moreno, Kopylova, Evguenia, Pasolli, Edoardo, Knight, Rob, Mirarab, Siavash, Huttenhower, Curtis, Segata, Nicola
Wydane w Nat Commun (2020)

Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle

od Pasolli, Edoardo, Asnicar, Francesco, Manara, Serena, Zolfo, Moreno, Karcher, Nicolai, Armanini, Federica, Beghini, Francesco, Manghi, Paolo, Tett, Adrian, Ghensi, Paolo, Collado, Maria Carmen, Rice, Benjamin L., DuLong, Casey, Morgan, Xochitl C., Golden, Christopher D., Quince, Christopher, Huttenhower, Curtis, Segata, Nicola
Wydane w Cell (2019)