Patterns of Immune Infiltration in Breast Cancer and Their Clinical Implications: A Gene-Expression-Based Retrospective Study

par Ali, H. Raza, Chlon, Leon, Pharoah, Paul D. P., Markowetz, Florian, Caldas, Carlos
Publié dans PLoS Med (2016)

Cancer stem cell markers in breast cancer: pathological, clinical and prognostic significance

par Ali, H Raza, Dawson, Sarah-Jane, Blows, Fiona M, Provenzano, Elena, Pharoah, Paul D, Caldas, Carlos
Publié 2011

Genome-driven integrated classification of breast cancer validated in over 7,500 samples

par Ali, H Raza, Rueda, Oscar M, Chin, Suet-Feung, Curtis, Christina, Dunning, Mark J, Aparicio, Samuel AJR, Caldas, Carlos
Publié 2014

Association between tumour infiltrating lymphocytes, histotype and clinical outcome in epithelial ovarian cancer

par James, Fiona R., Jiminez-Linan, Mercedes, Alsop, Jennifer, Mack, Marie, Song, Honglin, Brenton, James D., Pharoah, Paul D. P., Ali, H. Raza
Publié dans BMC Cancer (2017)

The C/EBPδ protein is stabilized by estrogen receptor α activity, inhibits SNAI2 expression, and associates with good prognosis in breast cancer

par Mendoza-Villanueva, Daniel, Balamurugan, Kuppusamy, Ali, H. Raza, Kim, Su-Ryun, Sharan, Shikha, Johnson, Randall C., Merchant, Anand S., Caldas, Carlos, Landberg, Göran, Sterneck, Esta
Publié dans Oncogene (2016)

Combined quantitative measures of ER, PR, HER2, and KI67 provide more prognostic information than categorical combinations in luminal breast cancer

par Abubakar, Mustapha, Figueroa, Jonine, Ali, H. Raza, Blows, Fiona, Lissowska, Jolanta, Caldas, Carlos, Easton, Douglas F., Sherman, Mark E., Garcia-Closas, Montserrat, Dowsett, Mitch, Pharoah, Paul D.
Publié dans Mod Pathol (2019)

Breast tumor microenvironment structures are associated with genomic features and clinical outcome

par Danenberg, Esther, Bardwell, Helen, Zanotelli, Vito R. T., Provenzano, Elena, Chin, Suet-Feung, Rueda, Oscar M., Green, Andrew, Rakha, Emad, Aparicio, Samuel, Ellis, Ian O., Bodenmiller, Bernd, Caldas, Carlos, Ali, H. Raza
Publié dans Nat Genet (2022)

Therapeutic relevance of the PP2A-B55 inhibitory kinase MASTL/Greatwall in breast cancer

par Álvarez-Fernández, Mónica, Sanz-Flores, María, Sanz-Castillo, Belén, Salazar-Roa, María, Partida, David, Zapatero-Solana, Elisabet, Ali, H. Raza, Manchado, Eusebio, Lowe, Scott, VanArsdale, Todd, Shields, David, Caldas, Carlos, Quintela-Fandino, Miguel, Malumbres, Marcos
Publié dans Cell Death Differ (2017)

Differential oestrogen receptor binding is associated with clinical outcome in breast cancer

par Ross-Innes, Caryn S., Stark, Rory, Teschendorff, Andrew E., Holmes, Kelly A., Ali, H. Raza, Dunning, Mark J., Brown, Gordon D., Gojis, Ondrej, Ellis, Ian O., Green, Andrew R., Ali, Simak, Chin, Suet-Feung, Palmieri, Carlo, Caldas, Carlos, Carroll, Jason S.
Publié 2012

p120-catenin prevents multinucleation through control of MKLP1-dependent RhoA activity during cytokinesis

par van de Ven, Robert A.H., de Groot, Jolien S., Park, Danielle, van Domselaar, Robert, de Jong, Danielle, Szuhai, Karoly, van der Wall, Elsken, Rueda, Oscar M., Ali, H. Raza, Caldas, Carlos, van Diest, Paul J., Hetzer, Martin W., Sahai, Erik, Derksen, Patrick W.B.
Publié dans Nat Commun (2016)

Corrigendum: p120-catenin prevents multinucleation through control of MKLP1-dependent RhoA activity during cytokinesis

par van de Ven, Robert A. H., de Groot, Jolien S., Park, Danielle, van Domselaar, Robert, de Jong, Danielle, Szuhai, Karoly, van der Wall, Elsken, Rueda, Oscar M., Ali, H. Raza, Caldas, Carlos, van Diest, Paul J., Hetzer, Martin W., Sahai, Erik, Derksen, Patrick W. B.
Publié dans Nat Commun (2017)

Cancer-associated fibroblast compositions change with breast-cancer progression linking the ratio of S100A4(+) and PDPN(+) CAFs to clinical outcome

par Friedman, Gil, Levi-Galibov, Oshrat, David, Eyal, Bornstein, Chamutal, Giladi, Amir, Dadiani, Maya, Mayo, Avi, Halperin, Coral, Pevsner-Fischer, Meirav, Lavon, Hagar, Mayer, Shimrit, Nevo, Reinat, Stein, Yaniv, Balint-Lahat, Nora, Barshack, Iris, Ali, H. Raza, Caldas, Carlos, Nili-Gal-Yam, Einav, Alon, Uri, Amit, Ido, Scherz-Shouval, Ruth
Publié dans Nat Cancer (2020)

Computational pathology of pre-treatment biopsies identifies lymphocyte density as a predictor of response to neoadjuvant chemotherapy in breast cancer

par Ali, H. Raza, Dariush, Aliakbar, Provenzano, Elena, Bardwell, Helen, Abraham, Jean E., Iddawela, Mahesh, Vallier, Anne-Laure, Hiller, Louise, Dunn, Janet. A., Bowden, Sarah J., Hickish, Tamas, McAdam, Karen, Houston, Stephen, Irwin, Mike J., Pharoah, Paul D. P., Brenton, James D., Walton, Nicholas A., Earl, Helena M., Caldas, Carlos
Publié dans Breast Cancer Res (2016)

Multifocal clonal evolution characterized using circulating tumour DNA in a case of metastatic breast cancer

par Murtaza, Muhammed, Dawson, Sarah-Jane, Pogrebniak, Katherine, Rueda, Oscar M., Provenzano, Elena, Grant, John, Chin, Suet-Feung, Tsui, Dana W. Y., Marass, Francesco, Gale, Davina, Ali, H. Raza, Shah, Pankti, Contente-Cuomo, Tania, Farahani, Hossein, Shumansky, Karey, Kingsbury, Zoya, Humphray, Sean, Bentley, David, Shah, Sohrab P., Wallis, Matthew, Rosenfeld, Nitzan, Caldas, Carlos
Publié dans Nat Commun (2015)

Landscapes of cellular phenotypic diversity in breast cancer xenografts and their impact on drug response

par Georgopoulou, Dimitra, Callari, Maurizio, Rueda, Oscar M., Shea, Abigail, Martin, Alistair, Giovannetti, Agnese, Qosaj, Fatime, Dariush, Ali, Chin, Suet-Feung, Carnevalli, Larissa S., Provenzano, Elena, Greenwood, Wendy, Lerda, Giulia, Esmaeilishirazifard, Elham, O’Reilly, Martin, Serra, Violeta, Bressan, Dario, Mills, Gordon B., Ali, H. Raza, Cosulich, Sabina S., Hannon, Gregory J., Bruna, Alejandra, Caldas, Carlos
Publié dans Nat Commun (2021)

ZNF703 is a common Luminal B breast cancer oncogene that differentially regulates luminal and basal progenitors in human mammary epithelium

par Holland, Daniel G, Burleigh, Angela, Git, Anna, Goldgraben, Mae A, Perez-Mancera, Pedro A, Chin, Suet-Feung, Hurtado, Antonio, Bruna, Alejandra, Ali, H Raza, Greenwood, Wendy, Dunning, Mark J, Samarajiwa, Shamith, Menon, Suraj, Rueda, Oscar M, Lynch, Andy G, McKinney, Steven, Ellis, Ian O, Eaves, Connie J, Carroll, Jason S, Curtis, Christina, Aparicio, Samuel, Caldas, Carlos
Publié 2011

Dynamics of breast cancer relapse reveal late recurring ER-positive genomic subgroups

par Rueda, Oscar M., Sammut, Stephen-John, Seoane, Jose A, Chin, Suet-Feung, Caswell-Jin, Jennifer L, Callari, Maurizio, Batra, Rajbir, Pereira, Bernard, Bruna, Alejandra, Ali, H Raza, Provenzano, Elena, Liu, Bin, Parisien, Michelle, Gillett, Cheryl, McKinney, Steven, Green, Andrew R., Murphy, Leigh, Purushotham, Arnie, Ellis, Ian O., Pharoah, Paul D., Rueda, Cristina, Aparicio, Samuel AJR, Caldas, Carlos, Curtis, Christina
Publié dans Nature (2019)

The Genomic and Immune Landscapes of Lethal Metastatic Breast Cancer

par De Mattos-Arruda, Leticia, Sammut, Stephen-John, Ross, Edith M., Bashford-Rogers, Rachael, Greenstein, Erez, Markus, Havell, Morganella, Sandro, Teng, Yvonne, Maruvka, Yosef, Pereira, Bernard, Rueda, Oscar M., Chin, Suet-Feung, Contente-Cuomo, Tania, Mayor, Regina, Arias, Alexandra, Ali, H. Raza, Cope, Wei, Tiezzi, Daniel, Dariush, Aliakbar, Dias Amarante, Tauanne, Reshef, Dan, Ciriaco, Nikaoly, Martinez-Saez, Elena, Peg, Vicente, Ramon y Cajal, Santiago, Cortes, Javier, Vassiliou, George, Getz, Gad, Nik-Zainal, Serena, Murtaza, Muhammed, Friedman, Nir, Markowetz, Florian, Seoane, Joan, Caldas, Carlos
Publié dans Cell Rep (2019)

Heterogeneity of luminal breast cancer characterised by immunohistochemical expression of basal markers

par Sung, Hyuna, Garcia-Closas, Montserrat, Chang-Claude, Jenny, Blows, Fiona M, Ali, H Raza, Figueroa, Jonine, Nevanlinna, Heli, Fagerholm, Rainer, Heikkilä, Päivi, Blomqvist, Carl, Giles, Graham G, Milne, Roger L, Southey, Melissa C, McLean, Catriona, Mannermaa, Arto, Kosma, Veli-Matti, Kataja, Vesa, Sironen, Reijo, Couch, Fergus J, Olson, Janet E, Hallberg, Emily, Olswold, Curtis, Cox, Angela, Cross, Simon S, Kraft, Peter, Tamimi, Rulla M, Eliassen, A Heather, Schmidt, Marjanka K, Bolla, Manjeet K, Wang, Qin, Easton, Douglas, Howat, William J, Coulson, Penny, Pharoah, Paul DP, Sherman, Mark E, Yang, Xiaohong R
Publié dans Br J Cancer (2016)

Etiology of hormone receptor positive breast cancer differs by levels of histologic grade and proliferation

par Abubakar, Mustapha, Chang‐Claude, Jenny, Ali, H. Raza, Chatterjee, Nilanjan, Coulson, Penny, Daley, Frances, Blows, Fiona, Benitez, Javier, Milne, Roger L., Brenner, Hermann, Stegmaier, Christa, Mannermaa, Arto, Rudolph, Anja, Sinn, Peter, Couch, Fergus J., Devilee, Peter, Tollenaar, Rob A.E.M., Seynaeve, Caroline, Figueroa, Jonine, Lissowska, Jolanta, Hewitt, Stephen, Hooning, Maartje J., Hollestelle, Antoinette, Foekens, Renée, Koppert, Linetta B., Investigators, kConFab, Bolla, Manjeet K., Wang, Qin, Jones, Michael E., Schoemaker, Minouk J., Keeman, Renske, Easton, Douglas F., Swerdlow, Anthony J., Sherman, Mark E., Schmidt, Marjanka K., Pharoah, Paul D., Garcia‐Closas, Montserrat
Publié dans Int J Cancer (2018)