Gene set internal coherence in the context of functional profiling

par Montaner, David, Minguez, Pablo, Al-Shahrour, Fátima, Dopazo, Joaquín
Publié 2009

A large scale survey reveals that chromosomal copy-number alterations significantly affect gene modules involved in cancer initiation and progression

par Alloza, Eva, Al-Shahrour, Fátima, Cigudosa, Juan C, Dopazo, Joaquín
Publié 2011

SNOW, a web-based tool for the statistical analysis of protein–protein interaction networks

par Minguez, Pablo, Götz, Stefan, Montaner, David, Al-Shahrour, Fatima, Dopazo, Joaquin
Publié 2009

BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments

par Al-Shahrour, Fátima, Minguez, Pablo, Vaquerizas, Juan M., Conde, Lucía, Dopazo, Joaquín
Publié 2005

In Silico Drug Prescription for Targeting Cancer Patient Heterogeneity and Prediction of Clinical Outcome

par Piñeiro-Yáñez, Elena, Jiménez-Santos, María José, Gómez-López, Gonzalo, Al-Shahrour, Fátima
Publié dans Cancers (Basel) (2019)

Functional profiling and gene expression analysis of chromosomal copy number alterations

par Conde, Lucía, Montaner, David, Burguet-Castell, Jordi, Tárraga, Joaquín, Al-Shahrour, Fátima, Dopazo, Joaquín
Publié 2007

Selection upon Genome Architecture: Conservation of Functional Neighborhoods with Changing Genes

par Al-Shahrour, Fátima, Minguez, Pablo, Marqués-Bonet, Tomás, Gazave, Elodie, Navarro, Arcadi, Dopazo, Joaquín
Publié 2010

FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments

par Al-Shahrour, Fátima, Minguez, Pablo, Tárraga, Joaquín, Medina, Ignacio, Alloza, Eva, Montaner, David, Dopazo, Joaquín
Publié 2007

From genes to functional classes in the study of biological systems

par Huerta-Cepas Jaime, Dopazo Hernán, Arbiza Leonardo, Al-Shahrour Fátima, Mínguez Pablo, Montaner David, Dopazo Joaquín
Publié 2007-04-01

From genes to functional classes in the study of biological systems

par Al-Shahrour, Fátima, Arbiza, Leonardo, Dopazo, Hernán, Huerta-Cepas, Jaime, Mínguez, Pablo, Montaner, David, Dopazo, Joaquín
Publié 2007

ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling

par Conde, Lucía, Montaner, David, Burguet-Castell, Jordi, Tárraga, Joaquín, Medina, Ignacio, Al-Shahrour, Fátima, Dopazo, Joaquín
Publié 2007

Distinct roles for long-term hematopoietic stem cells and erythroid precursor cells in a murine model of Jak2V617F-mediated polycythemia vera

par Mullally, Ann, Poveromo, Luke, Schneider, Rebekka K., Al-Shahrour, Fatima, Lane, Steven W., Ebert, Benjamin L.
Publié 2012

GEPAS: a web-based resource for microarray gene expression data analysis

par Herrero, Javier, Al-Shahrour, Fátima, Díaz-Uriarte, Ramón, Mateos, Álvaro, Vaquerizas, Juan M., Santoyo, Javier, Dopazo, Joaquín
Publié 2003

PupaSNP Finder: a web tool for finding SNPs with putative effect at transcriptional level

par Conde, Lucía, Vaquerizas, Juan M., Santoyo, Javier, Al-Shahrour, Fátima, Ruiz-Llorente, Sergio, Robledo, Mercedes, Dopazo, Joaquín
Publié 2004

DRES-12. FUNCTIONAL GENETIC APPROACHES TO OVERCOME TEMOZOLOMIDE RESISTANCE IN GLIOBLASTOMA

par Nogales-Gomez, Paula, Perales-Patón, Javier, Jimenez-Schuhmacher, Alberto, Curiel-Garcia, Alvaro, Al-Shahrour, Fatima, Squatrito, Massimo
Publié dans Neuro Oncol (2018)

The AnnoLite and AnnoLyze programs for comparative annotation of protein structures

par Marti-Renom, Marc A, Rossi, Andrea, Al-Shahrour, Fátima, Davis, Fred P, Pieper, Ursula, Dopazo, Joaquín, Sali, Andrej
Publié 2007

Gene set-based analysis of polymorphisms: finding pathways or biological processes associated to traits in genome-wide association studies

par Medina, Ignacio, Montaner, David, Bonifaci, Nuria, Pujana, Miguel Angel, Carbonell, José, Tarraga, Joaquin, Al-Shahrour, Fatima, Dopazo, Joaquin
Publié 2009

New challenges in gene expression data analysis and the extended GEPAS

par Herrero, Javier, Vaquerizas, Juan M., Al-Shahrour, Fátima, Conde, Lucía, Mateos, Álvaro, Díaz-Uriarte, Javier Santoyo Ramón, Dopazo, Joaquín
Publié 2004

GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data

par Vaquerizas, Juan M., Conde, Lucía, Yankilevich, Patricio, Cabezón, Amaya, Minguez, Pablo, Díaz-Uriarte, Ramón, Al-Shahrour, Fátima, Herrero, Javier, Dopazo, Joaquín
Publié 2005

Evidence for systems-level molecular mechanisms of tumorigenesis

par Hernández, Pilar, Huerta-Cepas, Jaime, Montaner, David, Al-Shahrour, Fátima, Valls, Joan, Gómez, Laia, Capellá, Gabriel, Dopazo, Joaquín, Pujana, Miguel Angel
Publié 2007