Gene Co-Expression Network Analysis for Identifying Modules and Functionally Enriched Pathways in Type 1 Diabetes

بواسطة Riquelme Medina, Ignacio, Lubovac-Pilav, Zelmina
الحاوية / القاعدة PLoS One (2016)

A web tool for the design and management of panels of genes for targeted enrichment and massive sequencing for clinical applications

بواسطة Alemán, Alejandro, Garcia-Garcia, Francisco, Medina, Ignacio, Dopazo, Joaquín
منشور في 2014

HPG pore: an efficient and scalable framework for nanopore sequencing data

بواسطة Tarraga, Joaquin, Gallego, Asunción, Arnau, Vicente, Medina, Ignacio, Dopazo, Joaquin
الحاوية / القاعدة BMC Bioinformatics (2016)

Serial Expression Analysis: a web tool for the analysis of serial gene expression data

بواسطة Nueda, Maria José, Carbonell, José, Medina, Ignacio, Dopazo, Joaquín, Conesa, Ana
منشور في 2010

A web-based interactive framework to assist in the prioritization of disease candidate genes in whole-exome sequencing studies

بواسطة Alemán, Alejandro, Garcia-Garcia, Francisco, Salavert, Francisco, Medina, Ignacio, Dopazo, Joaquín
منشور في 2014

Fast inexact mapping using advanced tree exploration on backward search methods

بواسطة Salavert, José, Tomás, Andrés, Tárraga, Joaquín, Medina, Ignacio, Dopazo, Joaquín, Blanquer, Ignacio
الحاوية / القاعدة BMC Bioinformatics (2015)

Inferring the regulatory network behind a gene expression experiment

بواسطة Bleda, Marta, Medina, Ignacio, Alonso, Roberto, De Maria, Alejandro, Salavert, Francisco, Dopazo, Joaquin
منشور في 2012

Inferring the functional effect of gene expression changes in signaling pathways

بواسطة Sebastián-León, Patricia, Carbonell, José, Salavert, Francisco, Sanchez, Rubén, Medina, Ignacio, Dopazo, Joaquín
منشور في 2013

A parallel and sensitive software tool for methylation analysis on multicore platforms

بواسطة Tárraga, Joaquín, Pérez, Mariano, Orduña, Juan M., Duato, José, Medina, Ignacio, Dopazo, Joaquín
الحاوية / القاعدة Bioinformatics (2015)

Phylemon: a suite of web tools for molecular evolution, phylogenetics and phylogenomics

بواسطة Tárraga, Joaquín, Medina, Ignacio, Arbiza, Leonardo, Huerta-Cepas, Jaime, Gabaldón, Toni, Dopazo, Joaquín, Dopazo, Hernán
منشور في 2007

FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments

بواسطة Al-Shahrour, Fátima, Minguez, Pablo, Tárraga, Joaquín, Medina, Ignacio, Alloza, Eva, Montaner, David, Dopazo, Joaquín
منشور في 2007

Assessing the impact of mutations found in next generation sequencing data over human signaling pathways

بواسطة Hernansaiz-Ballesteros, Rosa D., Salavert, Francisco, Sebastián-León, Patricia, Alemán, Alejandro, Medina, Ignacio, Dopazo, Joaquín
الحاوية / القاعدة Nucleic Acids Res (2015)

Web-based network analysis and visualization using CellMaps

بواسطة Salavert, Francisco, García-Alonso, Luz, Sánchez, Rubén, Alonso, Roberto, Bleda, Marta, Medina, Ignacio, Dopazo, Joaquín
الحاوية / القاعدة Bioinformatics (2016)

PyCellBase, an efficient python package for easy retrieval of biological data from heterogeneous sources

بواسطة Perez-Gil, Daniel, Lopez, Francisco J., Dopazo, Joaquin, Marin-Garcia, Pablo, Rendon, Augusto, Medina, Ignacio
الحاوية / القاعدة BMC Bioinformatics (2019)

ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling

بواسطة Conde, Lucía, Montaner, David, Burguet-Castell, Jordi, Tárraga, Joaquín, Medina, Ignacio, Al-Shahrour, Fátima, Dopazo, Joaquín
منشور في 2007

VARIANT: Command Line, Web service and Web interface for fast and accurate functional characterization of variants found by Next-Generation Sequencing

بواسطة Medina, Ignacio, De Maria, Alejandro, Bleda, Marta, Salavert, Francisco, Alonso, Roberto, Gonzalez, Cristina Y., Dopazo, Joaquin
منشور في 2012

Biological processes, properties and molecular wiring diagrams of candidate low-penetrance breast cancer susceptibility genes

بواسطة Bonifaci, Núria, Berenguer, Antoni, Díez, Javier, Reina, Oscar, Medina, Ignacio, Dopazo, Joaquín, Moreno, Víctor, Pujana, Miguel Angel
منشور في 2008

Genome Maps, a new generation genome browser

بواسطة Medina, Ignacio, Salavert, Francisco, Sanchez, Rubén, de Maria, Alejandro, Alonso, Roberto, Escobar, Pablo, Bleda, Marta, Dopazo, Joaquín
منشور في 2013

Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases

بواسطة Reumers, Joke, Conde, Lucia, Medina, Ignacio, Maurer-Stroh, Sebastian, Van Durme, Joost, Dopazo, Joaquin, Rousseau, Frederic, Schymkowitz, Joost
منشور في 2008

Gene set-based analysis of polymorphisms: finding pathways or biological processes associated to traits in genome-wide association studies

بواسطة Medina, Ignacio, Montaner, David, Bonifaci, Nuria, Pujana, Miguel Angel, Carbonell, José, Tarraga, Joaquin, Al-Shahrour, Fatima, Dopazo, Joaquin
منشور في 2009