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Fast inexact mapping using advanced tree exploration on backward search methods

BACKGROUND: Short sequence mapping methods for Next Generation Sequencing consist on a combination of seeding techniques followed by local alignment based on dynamic programming approaches. Most seeding algorithms are based on backward search alignment, using the Burrows Wheeler Transform, the Ferra...

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Bibliografiset tiedot
Julkaisussa:BMC Bioinformatics
Päätekijät: Salavert, José, Tomás, Andrés, Tárraga, Joaquín, Medina, Ignacio, Dopazo, Joaquín, Blanquer, Ignacio
Aineistotyyppi: Artigo
Kieli:Inglês
Julkaistu: BioMed Central 2015
Aiheet:
Linkit:https://ncbi.nlm.nih.gov/pmc/articles/PMC4384339/
https://ncbi.nlm.nih.gov/pubmed/25626517
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-014-0438-3
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