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Simplitigs as an efficient and scalable representation of de Bruijn graphs
de Bruijn graphs play an essential role in bioinformatics, yet they lack a universal scalable representation. Here, we introduce simplitigs as a compact, efficient, and scalable representation, and ProphAsm, a fast algorithm for their computation. For the example of assemblies of model organisms and...
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| Gepubliceerd in: | Genome Biol |
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| Hoofdauteurs: | , , |
| Formaat: | Artigo |
| Taal: | Inglês |
| Gepubliceerd in: |
BioMed Central
2021
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| Onderwerpen: | |
| Online toegang: | https://ncbi.nlm.nih.gov/pmc/articles/PMC8025321/ https://ncbi.nlm.nih.gov/pubmed/33823902 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-021-02297-z |
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