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An Efficient, Scalable, and Exact Representation of High-Dimensional Color Information Enabled Using de Bruijn Graph Search

The colored de Bruijn graph (cdbg) and its variants have become an important combinatorial structure used in numerous areas in genomics, such as population-level variation detection in metagenomic samples, large-scale sequence search, and cdbg-based reference sequence indices. As samples or genomes...

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Библиографические подробности
Опубликовано в: :J Comput Biol
Главные авторы: Almodaresi, Fatemeh, Pandey, Prashant, Ferdman, Michael, Johnson, Rob, Patro, Rob
Формат: Artigo
Язык:Inglês
Опубликовано: Mary Ann Liebert, Inc., publishers 2020
Предметы:
Online-ссылка:https://ncbi.nlm.nih.gov/pmc/articles/PMC7185321/
https://ncbi.nlm.nih.gov/pubmed/32176522
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1089/cmb.2019.0322
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