An alignment-free heuristic for fast sequence comparisons with applications to phylogeny reconstruction

BACKGROUND: Alignment-free methods for sequence comparisons have become popular in many bioinformatics applications, specifically in the estimation of sequence similarity measures to construct phylogenetic trees. Recently, the average common substring measure, ACS, and its k-mismatch counterpart, AC...

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Bibliographic Details
Published in:BMC Bioinformatics
Main Authors: Chockalingam, Sriram P., Pannu, Jodh, Hooshmand, Sahar, Thankachan, Sharma V., Aluru, Srinivas
Format: Artigo
Language:Inglês
Published: BioMed Central 2020
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Research
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC7672814/
https://ncbi.nlm.nih.gov/pubmed/33203364
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-020-03738-5
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