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HandAlign: Bayesian multiple sequence alignment, phylogeny and ancestral reconstruction

Summary: We describe handalign, a software package for Bayesian reconstruction of phylogenetic history. The underlying model of sequence evolution describes indels and substitutions. Alignments, trees and model parameters are all treated as jointly dependent random variables and sampled via Metropol...

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Sonraí Bibleagrafaíochta
Main Authors: Westesson, Oscar, Barquist, Lars, Holmes, Ian
Formáid: Artigo
Teanga:Inglês
Foilsithe: Oxford University Press 2012
Ábhair:
Rochtain Ar Líne:https://ncbi.nlm.nih.gov/pmc/articles/PMC3324510/
https://ncbi.nlm.nih.gov/pubmed/22285828
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/bts058
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