Chargement en cours...

GPU acceleration of Darwin read overlapper for de novo assembly of long DNA reads

BACKGROUND: In Overlap-Layout-Consensus (OLC) based de novo assembly, all reads must be compared with every other read to find overlaps. This makes the process rather slow and limits the practicality of using de novo assembly methods at a large scale in the field. Darwin is a fast and accurate read...

Description complète

Enregistré dans:
Détails bibliographiques
Publié dans:BMC Bioinformatics
Auteurs principaux: Ahmed, Nauman, Qiu, Tong Dong, Bertels, Koen, Al-Ars, Zaid
Format: Artigo
Langue:Inglês
Publié: BioMed Central 2020
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC7495891/
https://ncbi.nlm.nih.gov/pubmed/32938392
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-020-03685-1
Tags: Ajouter un tag
Pas de tags, Soyez le premier à ajouter un tag!