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Featherweight long read alignment using partitioned reference indexes

The advent of Nanopore sequencing has realised portable genomic research and applications. However, state of the art long read aligners and large reference genomes are not compatible with most mobile computing devices due to their high memory requirements. We show how memory requirements can be redu...

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Detalhes bibliográficos
Publicado no:Sci Rep
Main Authors: Gamaarachchi, Hasindu, Parameswaran, Sri, Smith, Martin A.
Formato: Artigo
Idioma:Inglês
Publicado em: Nature Publishing Group UK 2019
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6416333/
https://ncbi.nlm.nih.gov/pubmed/30867495
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/s41598-019-40739-8
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