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Pairwise alignment of nucleotide sequences using maximal exact matches
BACKGROUND: Pairwise alignment of short DNA sequences with affine-gap scoring is a common processing step performed in a range of bioinformatics analyses. Dynamic programming (i.e. Smith-Waterman algorithm) is widely used for this purpose. Despite using data level parallelisation, pairwise alignment...
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| Pubblicato in: | BMC Bioinformatics |
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| Autori principali: | , , , |
| Natura: | Artigo |
| Lingua: | Inglês |
| Pubblicazione: |
BioMed Central
2019
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| Soggetti: | |
| Accesso online: | https://ncbi.nlm.nih.gov/pmc/articles/PMC6528274/ https://ncbi.nlm.nih.gov/pubmed/31113356 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-019-2827-0 |
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