Featherweight long read alignment using partitioned reference indexes

Autor Gamaarachchi, Hasindu, Parameswaran, Sri, Smith, Martin A.
Vydáno v Sci Rep (2019)

GPU accelerated adaptive banded event alignment for rapid comparative nanopore signal analysis

Autor Gamaarachchi, Hasindu, Lam, Chun Wai, Jayatilaka, Gihan, Samarakoon, Hiruna, Simpson, Jared T., Smith, Martin A., Parameswaran, Sri
Vydáno v BMC Bioinformatics (2020)

Genopo: a nanopore sequencing analysis toolkit for portable Android devices

Autor Samarakoon, Hiruna, Punchihewa, Sanoj, Senanayake, Anjana, Hammond, Jillian M., Stevanovski, Igor, Ferguson, James M., Ragel, Roshan, Gamaarachchi, Hasindu, Deveson, Ira W.
Vydáno v Commun Biol (2020)

Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis

Autor Bull, Rowena A., Adikari, Thiruni N., Ferguson, James M., Hammond, Jillian M., Stevanovski, Igor, Beukers, Alicia G., Naing, Zin, Yeang, Malinna, Verich, Andrey, Gamaarachchi, Hasindu, Kim, Ki Wook, Luciani, Fabio, Stelzer-Braid, Sacha, Eden, John-Sebastian, Rawlinson, William D., van Hal, Sebastiaan J., Deveson, Ira W.
Vydáno v Nat Commun (2020)