SNooPer: a machine learning-based method for somatic variant identification from low-pass next-generation sequencing

BACKGROUND: Next-generation sequencing (NGS) allows unbiased, in-depth interrogation of cancer genomes. Many somatic variant callers have been developed yet accurate ascertainment of somatic variants remains a considerable challenge as evidenced by the varying mutation call rates and low concordance...

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Detalhes bibliográficos
Publicado no:BMC Genomics
Main Authors: Spinella, Jean-François, Mehanna, Pamela, Vidal, Ramon, Saillour, Virginie, Cassart, Pauline, Richer, Chantal, Ouimet, Manon, Healy, Jasmine, Sinnett, Daniel
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2016
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Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5109690/
https://ncbi.nlm.nih.gov/pubmed/27842494
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12864-016-3281-2
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