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Accelerating Smith-Waterman Alignment for Protein Database Search Using Frequency Distance Filtration Scheme Based on CPU-GPU Collaborative System

The Smith-Waterman (SW) algorithm has been widely utilized for searching biological sequence databases in bioinformatics. Recently, several works have adopted the graphic card with Graphic Processing Units (GPUs) and their associated CUDA model to enhance the performance of SW computations. However,...

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書目詳細資料
發表在:Int J Genomics
Main Authors: Liu, Yu, Hong, Yang, Lin, Chun-Yuan, Hung, Che-Lun
格式: Artigo
語言:Inglês
出版: Hindawi Publishing Corporation 2015
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在線閱讀:https://ncbi.nlm.nih.gov/pmc/articles/PMC4629039/
https://ncbi.nlm.nih.gov/pubmed/26568953
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1155/2015/761063
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