Accelerating Smith-Waterman Alignment for Protein Database Search Using Frequency Distance Filtration Scheme Based on CPU-GPU Collaborative System

The Smith-Waterman (SW) algorithm has been widely utilized for searching biological sequence databases in bioinformatics. Recently, several works have adopted the graphic card with Graphic Processing Units (GPUs) and their associated CUDA model to enhance the performance of SW computations. However,...

תיאור מלא

שמור ב:
מידע ביבליוגרפי
הוצא לאור ב:Int J Genomics
Main Authors: Liu, Yu, Hong, Yang, Lin, Chun-Yuan, Hung, Che-Lun
פורמט: Artigo
שפה:Inglês
יצא לאור: Hindawi Publishing Corporation 2015
נושאים:
Research Article
גישה מקוונת:https://ncbi.nlm.nih.gov/pmc/articles/PMC4629039/
https://ncbi.nlm.nih.gov/pubmed/26568953
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1155/2015/761063
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