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Improving RNA-Seq expression estimation by modeling isoform- and exon-specific read sequencing rate

BACKGROUND: The high-throughput sequencing technology, RNA-Seq, has been widely used to quantify gene and isoform expression in the study of transcriptome in recent years. Accurate expression measurement from the millions or billions of short generated reads is obstructed by difficulties. One is amb...

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Detalles Bibliográficos
Publicado en:BMC Bioinformatics
Main Authors: Liu, Xuejun, Shi, Xinxin, Chen, Chunlin, Zhang, Li
Formato: Artigo
Idioma:Inglês
Publicado: BioMed Central 2015
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Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC4609108/
https://ncbi.nlm.nih.gov/pubmed/26475308
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-015-0750-6
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