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Improving RNA-Seq expression estimation by modeling isoform- and exon-specific read sequencing rate

BACKGROUND: The high-throughput sequencing technology, RNA-Seq, has been widely used to quantify gene and isoform expression in the study of transcriptome in recent years. Accurate expression measurement from the millions or billions of short generated reads is obstructed by difficulties. One is amb...

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Publicat a:BMC Bioinformatics
Autors principals: Liu, Xuejun, Shi, Xinxin, Chen, Chunlin, Zhang, Li
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2015
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC4609108/
https://ncbi.nlm.nih.gov/pubmed/26475308
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-015-0750-6
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