CONSERTING: integrating copy number analysis with structural variation detection

We developed Copy Number Segmentation by Regression Tree in Next Generation Sequencing (CONSERTING), a novel algorithm for detecting somatic copy number alteration (CNA) using whole-genome sequencing (WGS) data. CONSERTING performs iterative analysis of segmentation by read depth change and localize...

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Bibliografske podrobnosti
izdano v:Nat Methods
Main Authors: Chen, Xiang, Gupta, Pankaj, Wang, Jianmin, Nakitandwe, Joy, Roberts, Kathryn, Dalton, James D., Parker, Matthew, Patel, Samir, Holmfeldt, Linda, Payne, Debbie, Easton, John, Ma, Jing, Rusch, Michael, Wu, Gang, Patel, Aman, J. Baker, Suzanne, Dyer, Michael A., Shurtleff, Sheila, Espy, Stephen, Pounds, Stanley, Downing, James R., Ellison, David W., Mullighan, Charles G., Zhang, Jinghui
Format: Artigo
Jezik:Inglês
Izdano: 2015
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Article
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC4591043/
https://ncbi.nlm.nih.gov/pubmed/25938371
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/nmeth.3394
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