Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph

BACKGROUND: Data volumes generated by next-generation sequencing (NGS) technologies is now a major concern for both data storage and transmission. This triggered the need for more efficient methods than general purpose compression tools, such as the widely used gzip method. RESULTS: We present a nov...

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Bibliografski detalji
Izdano u:BMC Bioinformatics
Glavni autori: Benoit, Gaëtan, Lemaitre, Claire, Lavenier, Dominique, Drezen, Erwan, Dayris, Thibault, Uricaru, Raluca, Rizk, Guillaume
Format: Artigo
Jezik:Inglês
Izdano: BioMed Central 2015
Teme:
Research Article
Online pristup:https://ncbi.nlm.nih.gov/pmc/articles/PMC4570262/
https://ncbi.nlm.nih.gov/pubmed/26370285
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-015-0709-7
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