Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph

BACKGROUND: Data volumes generated by next-generation sequencing (NGS) technologies is now a major concern for both data storage and transmission. This triggered the need for more efficient methods than general purpose compression tools, such as the widely used gzip method. RESULTS: We present a nov...

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Bibliographic Details
Published in:BMC Bioinformatics
Main Authors: Benoit, Gaëtan, Lemaitre, Claire, Lavenier, Dominique, Drezen, Erwan, Dayris, Thibault, Uricaru, Raluca, Rizk, Guillaume
Format: Artigo
Language:Inglês
Published: BioMed Central 2015
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Research Article
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC4570262/
https://ncbi.nlm.nih.gov/pubmed/26370285
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-015-0709-7
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