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Quantitative DMS mapping for automated RNA secondary structure inference

For decades, dimethyl sulfate (DMS) mapping has informed manual modeling of RNA structure in vitro and in vivo. Here, we incorporate DMS data into automated secondary structure inference using an energy minimization framework developed for 2′-OH acylation (SHAPE) map-ping. On six non-coding RNAs wit...

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Autores principales: Cordero, Pablo, Kladwang, Wipapat, VanLang, Christopher C., Das, Rhiju
Formato: Artigo
Lenguaje:Inglês
Publicado: 2012
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Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC3448840/
https://ncbi.nlm.nih.gov/pubmed/22913637
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/bi3008802
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