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Quantum Mechanical/Molecular Mechanical Study of the HDV Ribozyme: Impact of the Catalytic Metal Ion on the Mechanism

A recent crystal structure of the precleaved HDV ribozyme along with biochemical data support a mechanism for phosphodiester bond self-cleavage in which C75 acts as a general acid and bound Mg(2+) ion acts as a Lewis acid. Herein this precleaved crystal structure is used as the basis for quantum mec...

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Main Authors: Ganguly, Abir, Bevilacqua, Philip C., Hammes-Schiffer, Sharon
Format: Artigo
Jezik:Inglês
Izdano: 2011
Teme:
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC3233192/
https://ncbi.nlm.nih.gov/pubmed/22163069
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/jz2013215
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