Small RNA expression and strain specificity in the rat

par Linsen, Sam EV, de Wit, Elzo, de Bruijn, Ewart, Cuppen, Edwin
Publié 2010

MicroRNAs show a wide diversity of expression profiles in the developing and mature central nervous system

par Kapsimali, Marika, Kloosterman, Wigard P, de Bruijn, Ewart, Rosa, Frederic, Plasterk, Ronald HA, Wilson, Stephen W
Publié 2007

Accurate SNP and mutation detection by targeted custom microarray-based genomic enrichment of short-fragment sequencing libraries

par Mokry, Michal, Feitsma, Harma, Nijman, Isaac J., de Bruijn, Ewart, van der Zaag, Pieter J., Guryev, Victor, Cuppen, Edwin
Publié 2010

Efficient Double Fragmentation ChIP-seq Provides Nucleotide Resolution Protein-DNA Binding Profiles

par Mokry, Michal, Hatzis, Pantelis, de Bruijn, Ewart, Koster, Jan, Versteeg, Rogier, Schuijers, Jurian, van de Wetering, Marc, Guryev, Victor, Clevers, Hans, Cuppen, Edwin
Publié 2010

Cloning and expression of new microRNAs from zebrafish

par Kloosterman, Wigard P., Steiner, Florian A., Berezikov, Eugene, de Bruijn, Ewart, van de Belt, Jose, Verheul, Mark, Cuppen, Edwin, Plasterk, Ronald H.A.
Publié 2006

Systematic biases in DNA copy number originate from isolation procedures

par van Heesch, Sebastiaan, Mokry, Michal, Boskova, Veronika, Junker, Wade, Mehon, Rajdeep, Toonen, Pim, de Bruijn, Ewart, Shull, James D, Aitman, Timothy J, Cuppen, Edwin, Guryev, Victor
Publié 2013

Extensive localization of long noncoding RNAs to the cytosol and mono- and polyribosomal complexes

par van Heesch, Sebastiaan, van Iterson, Maarten, Jacobi, Jetse, Boymans, Sander, Essers, Paul B, de Bruijn, Ewart, Hao, Wensi, MacInnes, Alyson W, Cuppen, Edwin, Simonis, Marieke
Publié 2014

Genetic basis of transcriptome differences between the founder strains of the rat HXB/BXH recombinant inbred panel

par Simonis, Marieke, Atanur, Santosh S, Linsen, Sam, Guryev, Victor, Ruzius, Frans-Paul, Game, Laurence, Lansu, Nico, de Bruijn, Ewart, van Heesch, Sebastiaan, Jones, Steven JM, Pravenec, Michal, Aitman, Tim J, Cuppen, Edwin
Publié 2012

Mapping and phasing of structural variation in patient genomes using nanopore sequencing

par Cretu Stancu, Mircea, van Roosmalen, Markus J., Renkens, Ivo, Nieboer, Marleen M., Middelkamp, Sjors, de Ligt, Joep, Pregno, Giulia, Giachino, Daniela, Mandrile, Giorgia, Espejo Valle-Inclan, Jose, Korzelius, Jerome, de Bruijn, Ewart, Cuppen, Edwin, Talkowski, Michael E., Marschall, Tobias, de Ridder, Jeroen, Kloosterman, Wigard P.
Publié dans Nat Commun (2017)

A systematic genome-wide analysis of zebrafish protein-coding gene function

par Kettleborough, Ross N. W., Busch-Nentwich, Elisabeth M., Harvey, Steven A., Dooley, Christopher M., de Bruijn, Ewart, van Eeden, Freek, Sealy, Ian, White, Richard J., Herd, Colin, Nijman, Isaac J., Fényes, Fruzsina, Mehroke, Selina, Scahill, Catherine, Gibbons, Richard, Wali, Neha, Carruthers, Samantha, Hall, Amanda, Yen, Jennifer, Cuppen, Edwin, Stemple, Derek L.
Publié 2013

Study protocol: Whole genome sequencing Implementation in standard Diagnostics for Every cancer patient (WIDE)

par Samsom, Kris G., Bosch, Linda J. W., Schipper, Luuk J., Roepman, Paul, de Bruijn, Ewart, Hoes, Louisa R., Riethorst, Immy, Schoenmaker, Lieke, van der Kolk, Lizet E., Retèl, Valesca P., Frederix, Geert W. J., Buffart, Tineke E., van der Hoeven, Jacobus J. M., Voest, Emile E., Cuppen, Edwin, Monkhorst, Kim, Meijer, Gerrit A.
Publié dans BMC Med Genomics (2020)

Pan-cancer whole-genome analyses of metastatic solid tumours

par Priestley, Peter, Baber, Jonathan, Lolkema, Martijn P., Steeghs, Neeltje, de Bruijn, Ewart, Shale, Charles, Duyvesteyn, Korneel, Haidari, Susan, van Hoeck, Arne, Onstenk, Wendy, Roepman, Paul, Voda, Mircea, Bloemendal, Haiko J., Tjan-Heijnen, Vivianne C. G., van Herpen, Carla M. L., Labots, Mariette, Witteveen, Petronella O., Smit, Egbert F., Sleijfer, Stefan, Voest, Emile E., Cuppen, Edwin
Publié dans Nature (2019)

The PLETHORA Gene Regulatory Network Guides Growth and Cell Differentiation in Arabidopsis Roots

par Santuari, Luca, Sanchez-Perez, Gabino F., Luijten, Marijn, Rutjens, Bas, Terpstra, Inez, Berke, Lidija, Gorte, Maartje, Prasad, Kalika, Bao, Dongping, Timmermans-Hereijgers, Johanna L.P.M., Maeo, Kenichiro, Nakamura, Kenzo, Shimotohno, Akie, Pencik, Ales, Novak, Ondrej, Ljung, Karin, van Heesch, Sebastiaan, de Bruijn, Ewart, Cuppen, Edwin, Willemsen, Viola, Mähönen, Ari Pekka, Lukowitz, Wolfgang, Snel, Berend, de Ridder, Dick, Scheres, Ben, Heidstra, Renze
Publié dans Plant Cell (2016)

Sensitive Monogenic Noninvasive Prenatal Diagnosis by Targeted Haplotyping

par Vermeulen, Carlo, Geeven, Geert, de Wit, Elzo, Verstegen, Marjon J.A.M., Jansen, Rumo P.M., van Kranenburg, Melissa, de Bruijn, Ewart, Pulit, Sara L., Kruisselbrink, Evelien, Shahsavari, Zahra, Omrani, Davood, Zeinali, Fatemeh, Najmabadi, Hossein, Katsila, Theodora, Vrettou, Christina, Patrinos, George P., Traeger-Synodinos, Joanne, Splinter, Erik, Beekman, Jeffrey M., Kheradmand Kia, Sima, te Meerman, Gerard J., Ploos van Amstel, Hans Kristian, de Laat, Wouter
Publié dans Am J Hum Genet (2017)

Identification of Srp9 as a febrile seizure susceptibility gene

par Hessel, Ellen V S, de Wit, Marina, Wolterink-Donselaar, Inge G, Karst, Henk, de Graaff, Esther, van Lith, Hein A, de Bruijn, Ewart, de Sonnaville, Sophietje, Verbeek, Nienke E, Lindhout, Dick, de Kovel, Carolien G F, Koeleman, Bobby P C, van Kempen, Marjan, Brilstra, Eva, Cuppen, Edwin, Loos, Maarten, Spijker, Sabine S, Kan, Anne A, Baars, Susanne E, van Rijen, Peter C, Gosselaar, Peter H, Groot Koerkamp, Marian J A, Holstege, Frank C P, van Duijn, Cornelia, Vergeer, Jeanette, Moll, Henriette A, Taubøll, Erik, Heuser, Kjell, Ramakers, Geert M J, Pasterkamp, R Jeroen, van Nieuwenhuizen, Onno, Hoogenraad, Casper C, Kas, Martien J H, de Graan, Pierre N E
Publié dans Ann Clin Transl Neurol (2014)

Combined sequence-based and genetic mapping analysis of complex traits in outbred rats

par Baud, Amelie, Hermsen, Roel, Guryev, Victor, Stridh, Pernilla, Graham, Delyth, McBride, Martin W., Foroud, Tatiana, Calderari, Sophie, Diez, Margarita, Ockinger, Johan, Beyeen, Amennai D., Gillett, Alan, Abdelmagid, Nada, Guerreiro-Cacais, Andre Ortlieb, Jagodic, Maja, Tuncel, Jonatan, Norin, Ulrika, Beattie, Elisabeth, Huynh, Ngan, Miller, William H., Koller, Daniel L., Alam, Imranul, Falak, Samreen, Osborne-Pellegrin, Mary, Martinez-Membrives, Esther, Canete, Toni, Blazquez, Gloria, Vicens-Costa, Elia, Mont-Cardona, Carme, Diaz-Moran, Sira, Tobena, Adolf, Hummel, Oliver, Zelenika, Diana, Saar, Kathrin, Patone, Giannino, Bauerfeind, Anja, Bihoreau, Marie-Therese, Heinig, Matthias, Lee, Young-Ae, Rintisch, Carola, Schulz, Herbert, Wheeler, David A., Worley, Kim C., Muzny, Donna M., Gibbs, Richard A., Lathrop, Mark, Lansu, Nico, Toonen, Pim, Ruzius, Frans Paul, de Bruijn, Ewart, Hauser, Heidi, Adams, David J., Keane, Thomas, Atanur, Santosh S., Aitman, Tim J., Flicek, Paul, Malinauskas, Tomas, Jones, E. Yvonne, Ekman, Diana, Lopez-Aumatell, Regina, Dominiczak, Anna F, Johannesson, Martina, Holmdahl, Rikard, Olsson, Tomas, Gauguier, Dominique, Hubner, Norbert, Fernandez-Teruel, Alberto, Cuppen, Edwin, Mott, Richard, Flint, Jonathan
Publié 2013