RNA-align: quick and accurate alignment of RNA 3D structures based on size-independent TM-score(RNA)

Autor Gong, Sha, Zhang, Chengxin, Zhang, Yang
Vydáno v Bioinformatics (2019)

ADDRESS: A database of disease-associated human variants incorporating protein structure and folding stabilities

Autor Woodard, Jaie, Zhang, Chengxin, Zhang, Yang
Vydáno v J Mol Biol (2021)

COFACTOR: improved protein function prediction by combining structure, sequence and protein–protein interaction information

Autor Zhang, Chengxin, Freddolino, Peter L., Zhang, Yang
Vydáno v Nucleic Acids Res (2017)

Peratrial Device Closure of Atrial Septal Defect Under Transesophageal Echocardiographic Guidance without Fluoroscopy Compared to Conventional On-Pump Surgical Closure

Autor Guo, Zhixiang, Zhang, Chengxin, Wang, Huan, Ge, Shenglin
Vydáno v Braz J Cardiovasc Surg (2017)

BindProfX: Assessing Mutation-Induced Binding Affinity Change by Protein Interface Profiles with Pseudo-Counts

Autor Xiong, Peng, Zhang, Chengxin, Zheng, Wei, Zhang, Yang
Vydáno v J Mol Biol (2016)

Structure and Protein Interaction-based Gene Ontology Annotations Reveal Likely Functions of Uncharacterized Proteins on Human Chromosome 17

Autor Zhang, Chengxin, Wei, Xiaoqiong, Omenn, Gilbert S., Zhang, Yang
Vydáno v J Proteome Res (2018)

Blinded Testing of Function Annotation for uPE1 Proteins by I-TASSER/COFACTOR Pipeline Using the 2018–2019 Additions to neXtProt and the CAFA3 Challenge

Autor Zhang, Chengxin, Lane, Lydie, Omenn, Gilbert S., Zhang, Yang
Vydáno v J Proteome Res (2019)

MetaGO: Predicting Gene Ontology of non-homologous proteins through low-resolution protein structure prediction and protein-protein network mapping

Autor Zhang, Chengxin, Zheng, Wei, Freddolino, Peter L, Zhang, Yang
Vydáno v J Mol Biol (2018)

I-TASSER gateway: A protein structure and function prediction server powered by XSEDE

Autor Zheng, Wei, Zhang, Chengxin, Bell, Eric W., Zhang, Yang
Vydáno v Future Gener Comput Syst (2019)

Detecting Gene Ontology misannotations using taxon-specific rate ratio comparisons

Autor Wei, Xiaoqiong, Zhang, Chengxin, Freddolino, Peter L, Zhang, Yang
Vydáno v Bioinformatics (2020)

Rational Design of Adenylate Kinase Thermostability through Coevolution and Sequence Divergence Analysis

Autor Chang, Jian, Zhang, Chengxin, Cheng, Huaqiang, Tan, Yan-Wen
Vydáno v Int J Mol Sci (2021)

Inhibition of matrix metalloproteinase-9 with low-dose doxycycline reduces acute lung injury induced by cardiopulmonary bypass

Autor Zhang, Chengxin, Gong, Wenhui, Liu, Haiyuan, Guo, Zhixiang, Ge, Shenglin
Vydáno v Int J Clin Exp Med (2014)

Influence of Levosimendan Postconditioning on Apoptosis of Rat Lung Cells in a Model of Ischemia–Reperfusion Injury

Autor Zhang, Chengxin, Guo, Zhixiang, Liu, Haiyuan, Shi, Yinglu, Ge, Shenglin
Vydáno v PLoS One (2015)

Template-based and free modeling of I-TASSER and QUARK pipelines using predicted contact maps in CASP12

Autor Zhang, Chengxin, Mortuza, S. M., He, Baoji, Wang, Yanting, Zhang, Yang
Vydáno v Proteins (2017)

Assembling multidomain protein structures through analogous global structural alignments

Autor Zhou, Xiaogen, Hu, Jun, Zhang, Chengxin, Zhang, Guijun, Zhang, Yang
Vydáno v Proc Natl Acad Sci U S A (2019)

DeepMSA: constructing deep multiple sequence alignment to improve contact prediction and fold-recognition for distant-homology proteins

Autor Zhang, Chengxin, Zheng, Wei, Mortuza, S M, Li, Yang, Zhang, Yang
Vydáno v Bioinformatics (2020)

Identifying zoonotic origin of SARS-CoV-2 by modeling the binding affinity between Spike receptor-binding domain and host ACE2

Autor Huang, Xiaoqiang, Zhang, Chengxin, Pearce, Robin, Omenn, Gilbert S., Zhang, Yang
Vydáno v bioRxiv (2020)

Identifying the Zoonotic Origin of SARS-CoV-2 by Modeling the Binding Affinity Between the Spike Receptor-Binding Domain and Host ACE2

Autor Huang, Xiaoqiang, Zhang, Chengxin, Pearce, Robin, Omenn, Gilbert S., Zhang, Yang
Vydáno v J Proteome Res (2020)

ResPRE: high-accuracy protein contact prediction by coupling precision matrix with deep residual neural networks

Autor Li, Yang, Hu, Jun, Zhang, Chengxin, Yu, Dong-Jun, Zhang, Yang
Vydáno v Bioinformatics (2019)

Frequency of RBC Alloantibodies in Chinese Surgical Patients

Autor Wang, Qiushi, Yang, Qiaoni, Bai, Yingzhe, Zhang, Chengxin, Diao, Yanni, Fang, Deqiang
Vydáno 2012