RNA-align: quick and accurate alignment of RNA 3D structures based on size-independent TM-score(RNA)

Por Gong, Sha, Zhang, Chengxin, Zhang, Yang
Publicado no Bioinformatics (2019)

COFACTOR: improved protein function prediction by combining structure, sequence and protein–protein interaction information

Por Zhang, Chengxin, Freddolino, Peter L., Zhang, Yang
Publicado no Nucleic Acids Res (2017)

Peratrial Device Closure of Atrial Septal Defect Under Transesophageal Echocardiographic Guidance without Fluoroscopy Compared to Conventional On-Pump Surgical Closure

Por Guo, Zhixiang, Zhang, Chengxin, Wang, Huan, Ge, Shenglin
Publicado no Braz J Cardiovasc Surg (2017)

BindProfX: Assessing Mutation-Induced Binding Affinity Change by Protein Interface Profiles with Pseudo-Counts

Por Xiong, Peng, Zhang, Chengxin, Zheng, Wei, Zhang, Yang
Publicado no J Mol Biol (2016)

Structure and Protein Interaction-based Gene Ontology Annotations Reveal Likely Functions of Uncharacterized Proteins on Human Chromosome 17

Por Zhang, Chengxin, Wei, Xiaoqiong, Omenn, Gilbert S., Zhang, Yang
Publicado no J Proteome Res (2018)

Blinded Testing of Function Annotation for uPE1 Proteins by I-TASSER/COFACTOR Pipeline Using the 2018–2019 Additions to neXtProt and the CAFA3 Challenge

Por Zhang, Chengxin, Lane, Lydie, Omenn, Gilbert S., Zhang, Yang
Publicado no J Proteome Res (2019)

MetaGO: Predicting Gene Ontology of non-homologous proteins through low-resolution protein structure prediction and protein-protein network mapping

Por Zhang, Chengxin, Zheng, Wei, Freddolino, Peter L, Zhang, Yang
Publicado no J Mol Biol (2018)

I-TASSER gateway: A protein structure and function prediction server powered by XSEDE

Por Zheng, Wei, Zhang, Chengxin, Bell, Eric W., Zhang, Yang
Publicado no Future Gener Comput Syst (2019)

Detecting Gene Ontology misannotations using taxon-specific rate ratio comparisons

Por Wei, Xiaoqiong, Zhang, Chengxin, Freddolino, Peter L, Zhang, Yang
Publicado no Bioinformatics (2020)

Rational Design of Adenylate Kinase Thermostability through Coevolution and Sequence Divergence Analysis

Por Chang, Jian, Zhang, Chengxin, Cheng, Huaqiang, Tan, Yan-Wen
Publicado no Int J Mol Sci (2021)

Inhibition of matrix metalloproteinase-9 with low-dose doxycycline reduces acute lung injury induced by cardiopulmonary bypass

Por Zhang, Chengxin, Gong, Wenhui, Liu, Haiyuan, Guo, Zhixiang, Ge, Shenglin
Publicado no Int J Clin Exp Med (2014)

Influence of Levosimendan Postconditioning on Apoptosis of Rat Lung Cells in a Model of Ischemia–Reperfusion Injury

Por Zhang, Chengxin, Guo, Zhixiang, Liu, Haiyuan, Shi, Yinglu, Ge, Shenglin
Publicado no PLoS One (2015)

Template-based and free modeling of I-TASSER and QUARK pipelines using predicted contact maps in CASP12

Por Zhang, Chengxin, Mortuza, S. M., He, Baoji, Wang, Yanting, Zhang, Yang
Publicado no Proteins (2017)

Assembling multidomain protein structures through analogous global structural alignments

Por Zhou, Xiaogen, Hu, Jun, Zhang, Chengxin, Zhang, Guijun, Zhang, Yang
Publicado no Proc Natl Acad Sci U S A (2019)

DeepMSA: constructing deep multiple sequence alignment to improve contact prediction and fold-recognition for distant-homology proteins

Por Zhang, Chengxin, Zheng, Wei, Mortuza, S M, Li, Yang, Zhang, Yang
Publicado no Bioinformatics (2020)

Identifying zoonotic origin of SARS-CoV-2 by modeling the binding affinity between Spike receptor-binding domain and host ACE2

Por Huang, Xiaoqiang, Zhang, Chengxin, Pearce, Robin, Omenn, Gilbert S., Zhang, Yang
Publicado no bioRxiv (2020)

Identifying the Zoonotic Origin of SARS-CoV-2 by Modeling the Binding Affinity Between the Spike Receptor-Binding Domain and Host ACE2

Por Huang, Xiaoqiang, Zhang, Chengxin, Pearce, Robin, Omenn, Gilbert S., Zhang, Yang
Publicado no J Proteome Res (2020)

ResPRE: high-accuracy protein contact prediction by coupling precision matrix with deep residual neural networks

Por Li, Yang, Hu, Jun, Zhang, Chengxin, Yu, Dong-Jun, Zhang, Yang
Publicado no Bioinformatics (2019)

Frequency of RBC Alloantibodies in Chinese Surgical Patients

Por Wang, Qiushi, Yang, Qiaoni, Bai, Yingzhe, Zhang, Chengxin, Diao, Yanni, Fang, Deqiang
Publicado em 2012

LOMETS2: improved meta-threading server for fold-recognition and structure-based function annotation for distant-homology proteins

Por Zheng, Wei, Zhang, Chengxin, Wuyun, Qiqige, Pearce, Robin, Li, Yang, Zhang, Yang
Publicado no Nucleic Acids Res (2019)