A cell type-specific expression signature predicts haploinsufficient autism-susceptibility genes

par Zhang, Chaolin, Shen, Yufeng
Publié dans Hum Mutat (2016)

Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data

par Zhang, Chaolin, Darnell, Robert B.
Publié 2011

mRIN for direct assessment of genome-wide and gene-specific mRNA integrity from large-scale RNA-sequencing data

par Feng, Huijuan, Zhang, Xuegong, Zhang, Chaolin
Publié dans Nat Commun (2015)

Microexons: discovery, regulation, and function

par Ustianenko, Dmytro, Weyn-Vanhentenryck, Sebastien M., Zhang, Chaolin
Publié dans Wiley Interdiscip Rev RNA (2017)

Research on Temperature Variation during Coal and Gas Outbursts: Implications for Outburst Prediction in Coal Mines

par Zhang, Chaolin, Wang, Enyuan, Xu, Jiang, Peng, Shoujian
Publié dans Sensors (Basel) (2020)

Prediction of clustered RNA-binding protein motif sites in the mammalian genome

par Zhang, Chaolin, Lee, Kuang-Yung, Swanson, Maurice S., Darnell, Robert B.
Publié 2013

Systematic reconstruction of autism biology from massive genetic mutation profiles

par Luo, Weijun, Zhang, Chaolin, Jiang, Yong-hui, Brouwer, Cory R.
Publié dans Sci Adv (2018)

CLIP Tool Kit (CTK): a flexible and robust pipeline to analyze CLIP sequencing data

par Shah, Ankeeta, Qian, Yingzhi, Weyn-Vanhentenryck, Sebastien M, Zhang, Chaolin
Publié dans Bioinformatics (2017)

Dual-specificity splice sites function alternatively as 5′ and 3′ splice sites

par Zhang, Chaolin, Hastings, Michelle L., Krainer, Adrian R., Zhang, Michael Q.
Publié 2007

RNA landscape of evolution for optimal exon and intron discrimination

par Zhang, Chaolin, Li, Wen-Hsiung, Krainer, Adrian R., Zhang, Michael Q.
Publié 2008

OLego: fast and sensitive mapping of spliced mRNA-Seq reads using small seeds

par Wu, Jie, Anczuków, Olga, Krainer, Adrian R., Zhang, Michael Q., Zhang, Chaolin
Publié 2013

Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis

par Moore, Michael, Zhang, Chaolin, Gantman, Emily Conn, Mele, Aldo, Darnell, Jennifer C., Darnell, Robert B.
Publié 2014

A Role for Sensory end Organ-Derived Signals in Regulating Muscle Spindle Proprioceptor Phenotype

par Wu, Dawei, Schieren, Ira, Qian, Yingzhi, Zhang, Chaolin, Jessell, Thomas M., de Nooij, Joriene C.
Publié dans J Neurosci (2019)

Complexity and graded regulation of neuronal cell-type–specific alternative splicing revealed by single-cell RNA sequencing

par Feng, Huijuan, Moakley, Daniel F., Chen, Shuonan, McKenzie, Melissa G., Menon, Vilas, Zhang, Chaolin
Publié dans Proc Natl Acad Sci U S A (2021)

Defining the regulatory network of the tissue-specific splicing factors Fox-1 and Fox-2

par Zhang, Chaolin, Zhang, Zuo, Castle, John, Sun, Shuying, Johnson, Jason, Krainer, Adrian R., Zhang, Michael Q.
Publié 2008

NOVA-dependent regulation of cryptic NMD exons controls synaptic protein levels after seizure

par Eom, Taesun, Zhang, Chaolin, Wang, Huidong, Lay, Kenneth, Fak, John, Noebels, Jeffrey L, Darnell, Robert B
Publié 2013

Progressive impairment of muscle regeneration in muscleblind-like 3 isoform knockout mice

par Poulos, Michael G., Batra, Ranjan, Li, Moyi, Yuan, Yuan, Zhang, Chaolin, Darnell, Robert B., Swanson, Maurice S.
Publié 2013

Differential expression of 24,426 human alternative splicing events and predicted cis-regulation in 48 tissues and cell lines

par Castle, John C., Zhang, Chaolin, Shah, Jyoti K., Kulkarni, Amit V., Cooper, Thomas A., Johnson, Jason M.
Publié 2008

Stage-specific requirement for Mettl3-dependent m(6)A mRNA methylation during haematopoietic stem cell differentiation

par Lee, Heather, Bao, Suying, Qian, Yingzhi, Geula, Shay, Leslie, Juliana, Zhang, Chaolin, Hanna, Jacob H., Ding, Lei
Publié dans Nat Cell Biol (2019)

A clustering property of highly-degenerate transcription factor binding sites in the mammalian genome

par Zhang, Chaolin, Xuan, Zhenyu, Otto, Stefanie, Hover, John R., McCorkle, Sean R., Mandel, Gail, Zhang, Michael Q.
Publié 2006