Network-based group variable selection for detecting expression quantitative trait loci (eQTL)

von Zhang Xuegong, Wang Weichen
Veröffentlicht 2011-06-01

Network-based group variable selection for detecting expression quantitative trait loci (eQTL)

von Wang, Weichen, Zhang, Xuegong
Veröffentlicht 2011

Pinpointing transcription factor binding sites from ChIP-seq data with SeqSite

von Wang, Xi, Zhang, Xuegong
Veröffentlicht 2011

NURD: an implementation of a new method to estimate isoform expression from non-uniform RNA-seq data

von Ma, Xinyun, Zhang, Xuegong
Veröffentlicht 2013

Alignment-free supervised classification of metagenomes by recursive SVM

von Cui, Hongfei, Zhang, Xuegong
Veröffentlicht 2013

dbSUPER: a database of super-enhancers in mouse and human genome

von Khan, Aziz, Zhang, Xuegong
Veröffentlicht in Nucleic Acids Res (2016)

The Influence of the Global Gene Expression Shift on Downstream Analyses

von Xu, Qifeng, Zhang, Xuegong
Veröffentlicht in PLoS One (2016)

The identification of switch-like alternative splicing exons among multiple samples with RNA-Seq data

von Qin, Zhiyi, Zhang, Xuegong
Veröffentlicht in PLoS One (2017)

Making genome browsers portable and personal

von Khan, Aziz, Zhang, Xuegong
Veröffentlicht in Genome Biol (2018)

Integrative modeling reveals key chromatin and sequence signatures predicting super-enhancers

von Khan, Aziz, Zhang, Xuegong
Veröffentlicht in Sci Rep (2019)

Estimating the total genome length of a metagenomic sample using k-mers

von Hua, Kui, Zhang, Xuegong
Veröffentlicht in BMC Genomics (2019)

Finding distinct biclusters from background in gene expression matrices

von Wu, Zhengpeng, Ao, Jiangni, Zhang, Xuegong
Veröffentlicht 2007

Observations on shifted cumulative regulation

von Ye, Chao, Liu, Ying, Zhang, Xuegong
Veröffentlicht 2011

Integrating gene expression and protein-protein interaction network to prioritize cancer-associated genes

von Wu, Chao, Zhu, Jun, Zhang, Xuegong
Veröffentlicht 2012

Network-based differential gene expression analysis suggests cell cycle related genes regulated by E2F1 underlie the molecular difference between smoker and non-smoker lung adenoca...

von Wu, Chao, Zhu, Jun, Zhang, Xuegong
Veröffentlicht 2013

mRIN for direct assessment of genome-wide and gene-specific mRNA integrity from large-scale RNA-sequencing data

von Feng, Huijuan, Zhang, Xuegong, Zhang, Chaolin
Veröffentlicht in Nat Commun (2015)

Characterization of kinase gene expression and splicing profile in prostate cancer with RNA-Seq data

von Feng, Huijuan, Li, Tingting, Zhang, Xuegong
Veröffentlicht in BMC Genomics (2018)

Super-enhancers are transcriptionally more active and cell type-specific than stretch enhancers

von Khan, Aziz, Mathelier, Anthony, Zhang, Xuegong
Veröffentlicht in Epigenetics (2018)

Using DenseFly algorithm for cell searching on massive scRNA-seq datasets

von Chen, Yixin, Chen, Sijie, Zhang, Xuegong
Veröffentlicht in BMC Genomics (2020)

Basics of bioinformatics Lecture Notes of the Graduate Summer School on Bioinformatics of China /

von Jiang, Rui., Zhang, Xuegong., Zhang, Michael Q.
Veröffentlicht 2013