Methods for Measuring Fractional Synthetic Rates of Secretory Protein Analysis by Triple Quadrupole Mass Spectrometry

por Yates, Nathan A.
Publicado 2012

Isolation of serpin-interacting proteins in C. elegans using protein affinity purification

por Miedel, Mark T., Zeng, Xuemei, Yates, Nathan A., Silverman, Gary A., Luke, Cliff J.
Publicado 2014

Quantitative analysis of intact apolipoproteins in human HDL by top-down differential mass spectrometry

por Mazur, Matthew T., Cardasis, Helene L., Spellman, Daniel S., Liaw, Andy, Yates, Nathan A., Hendrickson, Ronald C.
Publicado 2010

Proteomic approach to discover human cancer viruses from formalin-fixed tissues

por Toptan, Tuna, Cantrell, Pamela S., Zeng, Xuemei, Liu, Yang, Sun, Mai, Yates, Nathan A., Chang, Yuan, Moore, Patrick S.
Publicado en JCI Insight (2020)

Lysine 63-linked polyubiquitination is required for EGF receptor degradation

por Huang, Fangtian, Zeng, Xuemei, Kim, Woong, Balasubramani, Manimalha, Fortian, Arola, Gygi, Steven P., Yates, Nathan A., Sorkin, Alexander
Publicado 2013

Quantitative Analysis of ATM Phosphorylation in Lymphocytes

por Bakkenist, Christopher J., Czambel, R. Kenneth, Lin, Yan, Yates, Nathan A., Zeng, Xuemei, Shogan, Jeffery, Schmitz, John C.
Publicado en DNA Repair (Amst) (2019)

The Capture of a Disabled Proteasome Identifies Erg25 as a Substrate for Endoplasmic Reticulum Associated Degradation

por Buck, Teresa M., Zeng, Xuemei, Cantrell, Pamela S., Cattley, Richard T., Hasanbasri, Zikri, Yates, Megan E., Nguyen, Diep, Yates, Nathan A., Brodsky, Jeffrey L.
Publicado en Mol Cell Proteomics (2020)

ABRF-PRG07: Advanced Quantitative Proteomics Study

por Falick, Arnold M., Lane, William S., Lilley, Kathryn S., MacCoss, Michael J., Phinney, Brett S., Sherman, Nicholas E., Weintraub, Susan T., Witkowska, H. Ewa, Yates, Nathan A.
Publicado 2011

Measuring biological age in mice using differential mass spectrometry

por Bell-Temin, Harris, Yousefzadeh, Matthew J., Bondarenko, Andrey, Quarles, Ellen, Jones-Laughner, Jacqueline, Robbins, Paul D., Ladiges, Warren, Niedernhofer, Laura J., Yates, Nathan A.
Publicado en Aging (Albany NY) (2019)

The N-cadherin interactome in primary cardiomyocytes as defined using quantitative proximity proteomics

por Li, Yang, Merkel, Chelsea D., Zeng, Xuemei, Heier, Jonathon A., Cantrell, Pamela S., Sun, Mai, Stolz, Donna B., Watkins, Simon C., Yates, Nathan A., Kwiatkowski, Adam V.
Publicado en J Cell Sci (2019)

Decellularized zebrafish cardiac extracellular matrix induces mammalian heart regeneration

por Chen, William C. W., Wang, Zhouguang, Missinato, Maria Azzurra, Park, Dae Woo, Long, Daniel Ward, Liu, Heng-Jui, Zeng, Xuemei, Yates, Nathan A., Kim, Kang, Wang, Yadong
Publicado en Sci Adv (2016)

Synaptic proteome compensation and resilience to psychosis in Alzheimer Disease

por Krivinko, Josh M, Erickson, Susan L., Ding, Ying, Sun, Zhe, Penzes, Peter, MacDonald, Matthew L., Yates, Nathan A., Ikonomovic, Milos D., Lopez, Oscar L., Sweet, Robert A., Kofler, Julia
Publicado en Am J Psychiatry (2018)

Nek7 Protects Telomeres from Oxidative DNA Damage by Phosphorylation and Stabilization of TRF1

por Tan, Rong, Nakajima, Satoshi, Wang, Qun, Sun, Hongxiang, Xue, Jing, Wu, Jian, Hellwig, Sabine, Zeng, Xuemei, Yates, Nathan A., Smithgall, Thomas E., Lei, Ming, Jiang, Yu, Levine, Arthur S., Su, Bing, Lan, Li
Publicado en Mol Cell (2017)

HSP90 regulates DNA repair via the interaction between XRCC1 and DNA polymerase β

por Fang, Qingming, Inanc, Burcu, Schamus, Sandy, Wang, Xiao-hong, Wei, Leizhen, Brown, Ashley R., Svilar, David, Sugrue, Kelsey F., Goellner, Eva M., Zeng, Xuemei, Yates, Nathan A., Lan, Li, Vens, Conchita, Sobol, Robert W.
Publicado en Nat Commun (2014)

Structural and functional dissection of reovirus capsid folding and assembly by the prefoldin-TRiC/CCT chaperone network

por Knowlton, Jonathan J., Gestaut, Daniel, Ma, Boxue, Taylor, Gwen, Seven, Alpay Burak, Leitner, Alexander, Wilson, Gregory J., Shanker, Sreejesh, Yates, Nathan A., Prasad, B. V. Venkataram, Aebersold, Ruedi, Chiu, Wah, Frydman, Judith, Dermody, Terence S.
Publicado en Proc Natl Acad Sci U S A (2021)

Altered Levels of Visinin-Like Protein 1 Correspond to Regional Neuronal Loss in Alzheimer Disease and Frontotemporal Lobar Degeneration

por Kirkwood, Caitlin M., MacDonald, Matthew L., Schempf, Tadhg A., Vatsavayi, Anil V., Ikonomovic, Milos D., Koppel, Jeremy L., Ding, Ying, Sun, Mai, Kofler, Julia K., Lopez, Oscar L., Yates, Nathan A., Sweet, Robert A.
Publicado en J Neuropathol Exp Neurol (2016)

Apolipoprotein E*4 (APOE*4) Genotype Is Associated with Altered Levels of Glutamate Signaling Proteins and Synaptic Coexpression Networks in the Prefrontal Cortex in Mild to Modera...

por Sweet, Robert A., MacDonald, Matthew L., Kirkwood, Caitlin M., Ding, Ying, Schempf, Tadhg, Jones-Laughner, Jackie, Kofler, Julia, Ikonomovic, Milos D., Lopez, Oscar L., Garver, Megan E., Fitz, Nicholas F., Koldamova, Radosveta, Yates, Nathan A.
Publicado en Mol Cell Proteomics (2016)

UBE3B Is a Calmodulin-regulated, Mitochondrion-associated E3 Ubiquitin Ligase

por Braganza, Andrea, Li, Jianfeng, Zeng, Xuemei, Yates, Nathan A., Dey, Nupur B., Andrews, Joel, Clark, Jennifer, Zamani, Leila, Wang, Xiao-hong, St. Croix, Claudette, O'Sullivan, Roderick, Garcia-Exposito, Laura, Brodsky, Jeffrey L., Sobol, Robert W.
Publicado en J Biol Chem (2017)

Growth Arrest by the Antitumor Steroidal Lactone Withaferin A in Human Breast Cancer Cells Is Associated with Down-regulation and Covalent Binding at Cysteine 303 of β-Tubulin

por Antony, Marie L., Lee, Joomin, Hahm, Eun-Ryeong, Kim, Su-Hyeong, Marcus, Adam I., Kumari, Vandana, Ji, Xinhua, Yang, Zhen, Vowell, Courtney L., Wipf, Peter, Uechi, Guy T., Yates, Nathan A., Romero, Guillermo, Sarkar, Saumendra N., Singh, Shivendra V.
Publicado 2014

Evaluation of early biomarkers of muscle anabolic response to testosterone

por Chen, Fabian, Lam, Raymond, Shaywitz, David, Hendrickson, Ronald C., Opiteck, Gregory J., Wishengrad, Dana, Liaw, Andy, Song, Qinghua, Stewart, Adrian J., Cummings, Corinne E., Beals, Chan, Yarasheski, Kevin E., Reicin, Alise, Ruddy, Marcella, Hu, Xuguang, Yates, Nathan A., Menetski, Joseph, Herman, Gary A.
Publicado 2011