Probing regulon of ArcA in Shewanella oneidensis MR-1 by integrated genomic analyses

Por Gao, Haichun, Wang, Xiaohu, Yang, Zamin K, Palzkill, Timothy, Zhou, Jizhong
Publicado em 2008

Global Transcriptome Analysis of the Cold Shock Response of Shewanella oneidensis MR-1 and Mutational Analysis of Its Classical Cold Shock Proteins

Por Gao, Haichun, Yang, Zamin K., Wu, Liyou, Thompson, Dorothea K., Zhou, Jizhong
Publicado em 2006

Microarray-Based Analysis of Microbial Community RNAs by Whole-Community RNA Amplification

Por Gao, Haichun, Yang, Zamin K., Gentry, Terry J., Wu, Liyou, Schadt, Christopher W., Zhou, Jizhong
Publicado em 2007

Comparative metagenomic and rRNA microbial diversity characterization using Archaeal and Bacterial synthetic communities

Por Shakya, Migun, Quince, Christopher, Campbell, James H., Yang, Zamin K., Schadt, Christopher W., Podar, Mircea
Publicado em 2013

Physiological Roles of ArcA, Crp, and EtrA and Their Interactive Control on Aerobic and Anaerobic Respiration in Shewanella oneidensis

Por Gao, Haichun, Wang, Xiaohu, Yang, Zamin K., Chen, Jingrong, Liang, Yili, Chen, Haijiang, Palzkill, Timothy, Zhou, Jizhong
Publicado em 2010

Life on the edge: functional genomic response of Ignicoccus hospitalis to the presence of Nanoarchaeum equitans

Por Giannone, Richard J, Wurch, Louie L, Heimerl, Thomas, Martin, Stanton, Yang, Zamin, Huber, Harald, Rachel, Reinhard, Hettich, Robert L, Podar, Mircea
Publicado no ISME J (2015)

<it>Clostridium thermocellum</it> ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress

Por Yang Shihui, Giannone Richard J, Dice Lezlee, Yang Zamin K, Engle Nancy L, Tschaplinski Timothy J, Hettich Robert L, Brown Steven D
Publicado em 2012-07-01

Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing

Por Griffen, Ann L, Beall, Clifford J, Campbell, James H, Firestone, Noah D, Kumar, Purnima S, Yang, Zamin K, Podar, Mircea, Leys, Eugene J
Publicado em 2012

Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress

Por Yang, Shihui, Giannone, Richard J, Dice, Lezlee, Yang, Zamin K, Engle, Nancy L, Tschaplinski, Timothy J, Hettich, Robert L, Brown, Steven D
Publicado em 2012

Rhizosphere microbiomes diverge among Populus trichocarpa plant-host genotypes and chemotypes, but it depends on soil origin

Por Veach, Allison M., Morris, Reese, Yip, Daniel Z., Yang, Zamin K., Engle, Nancy L., Cregger, Melissa A., Tschaplinski, Timothy J., Schadt, Christopher W.
Publicado no Microbiome (2019)

Establishment and metabolic analysis of a model microbial community for understanding trophic and electron accepting interactions of subsurface anaerobic environments

Por Miller, Lance D, Mosher, Jennifer J, Venkateswaran, Amudhan, Yang, Zamin K, Palumbo, Anthony V, Phelps, Tommy J, Podar, Mircea, Schadt, Christopher W, Keller, Martin
Publicado em 2010

Host genetic and environmental effects on mouse intestinal microbiota

Por Campbell, James H, Foster, Carmen M, Vishnivetskaya, Tatiana, Campbell, Alisha G, Yang, Zamin K, Wymore, Ann, Palumbo, Anthony V, Chesler, Elissa J, Podar, Mircea
Publicado em 2012

Mathematical models of lignin biosynthesis

Por Faraji, Mojdeh, Fonseca, Luis L., Escamilla-Treviño, Luis, Barros-Rios, Jaime, Engle, Nancy, Yang, Zamin K., Tschaplinski, Timothy J., Dixon, Richard A., Voit, Eberhard O.
Publicado no Biotechnol Biofuels (2018)

A Multifactor Analysis of Fungal and Bacterial Community Structure in the Root Microbiome of Mature Populus deltoides Trees

Por Shakya, Migun, Gottel, Neil, Castro, Hector, Yang, Zamin K., Gunter, Lee, Labbé, Jessy, Muchero, Wellington, Bonito, Gregory, Vilgalys, Rytas, Tuskan, Gerald, Podar, Mircea, Schadt, Christopher W.
Publicado em 2013

Microbial Community Stratification Linked to Utilization of Carbohydrates and Phosphorus Limitation in a Boreal Peatland at Marcell Experimental Forest, Minnesota, USA

Por Lin, Xueju, Tfaily, Malak M., Steinweg, J. Megan, Chanton, Patrick, Esson, Kaitlin, Yang, Zamin K., Chanton, Jeffrey P., Cooper, William, Schadt, Christopher W., Kostka, Joel E.
Publicado em 2014

A dynamic model of lignin biosynthesis in Brachypodium distachyon

Por Faraji, Mojdeh, Fonseca, Luis L., Escamilla-Treviño, Luis, Barros-Rios, Jaime, Engle, Nancy L., Yang, Zamin K., Tschaplinski, Timothy J., Dixon, Richard A., Voit, Eberhard O.
Publicado no Biotechnol Biofuels (2018)

Snapshot of iron response in <it>Shewanella oneidensis </it>by gene network reconstruction

Por Jacobsen Janet, Dehal Paramvir, Wu Liyou, Joachimiak Marcin, Xiong Wenlu, Luo Feng, Harris Daniel P, Yang Yunfeng, Yang Zamin, Palumbo Anthony V, Arkin Adam P, Zhou Jizhong
Publicado em 2009-03-01

Snapshot of iron response in Shewanella oneidensis by gene network reconstruction

Por Yang, Yunfeng, Harris, Daniel P, Luo, Feng, Xiong, Wenlu, Joachimiak, Marcin, Wu, Liyou, Dehal, Paramvir, Jacobsen, Janet, Yang, Zamin, Palumbo, Anthony V, Arkin, Adam P, Zhou, Jizhong
Publicado em 2009

Scavenging organic nitrogen and remodelling lipid metabolism are key survival strategies adopted by the endophytic fungi, Serendipita vermifera and Serendipita bescii to alleviate...

Por Ray, Prasun, Abraham, Paul E., Guo, Yingqing, Giannone, Richard J., Engle, Nancy L., Yang, Zamin K., Jacobson, Daniel, Hettich, Robert L., Tschaplinski, Timothy J., Craven, Kelly D.
Publicado no Environ Microbiol Rep (2019)

Characterization of Archaeal Community in Contaminated and Uncontaminated Surface Stream Sediments

Por Porat, Iris, Vishnivetskaya, Tatiana A., Mosher, Jennifer J., Brandt, Craig C., Yang, Zamin K., Brooks, Scott C., Liang, Liyuan, Drake, Meghan M., Podar, Mircea, Brown, Steven D., Palumbo, Anthony V.
Publicado em 2010