Probing regulon of ArcA in Shewanella oneidensis MR-1 by integrated genomic analyses

por Gao, Haichun, Wang, Xiaohu, Yang, Zamin K, Palzkill, Timothy, Zhou, Jizhong
Publicado 2008

Global Transcriptome Analysis of the Cold Shock Response of Shewanella oneidensis MR-1 and Mutational Analysis of Its Classical Cold Shock Proteins

por Gao, Haichun, Yang, Zamin K., Wu, Liyou, Thompson, Dorothea K., Zhou, Jizhong
Publicado 2006

Microarray-Based Analysis of Microbial Community RNAs by Whole-Community RNA Amplification

por Gao, Haichun, Yang, Zamin K., Gentry, Terry J., Wu, Liyou, Schadt, Christopher W., Zhou, Jizhong
Publicado 2007

Comparative metagenomic and rRNA microbial diversity characterization using Archaeal and Bacterial synthetic communities

por Shakya, Migun, Quince, Christopher, Campbell, James H., Yang, Zamin K., Schadt, Christopher W., Podar, Mircea
Publicado 2013

Physiological Roles of ArcA, Crp, and EtrA and Their Interactive Control on Aerobic and Anaerobic Respiration in Shewanella oneidensis

por Gao, Haichun, Wang, Xiaohu, Yang, Zamin K., Chen, Jingrong, Liang, Yili, Chen, Haijiang, Palzkill, Timothy, Zhou, Jizhong
Publicado 2010

Climate-driven divergence in plant-microbiome interactions generates range-wide variation in bud break phenology

por Ware, Ian M., Van Nuland, Michael E., Yang, Zamin K., Schadt, Christopher W., Schweitzer, Jennifer A., Bailey, Joseph K.
Publicado en Commun Biol (2021)

<it>Clostridium thermocellum</it> ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress

por Yang Shihui, Giannone Richard J, Dice Lezlee, Yang Zamin K, Engle Nancy L, Tschaplinski Timothy J, Hettich Robert L, Brown Steven D
Publicado 2012-07-01

Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing

por Griffen, Ann L, Beall, Clifford J, Campbell, James H, Firestone, Noah D, Kumar, Purnima S, Yang, Zamin K, Podar, Mircea, Leys, Eugene J
Publicado 2012

Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress

por Yang, Shihui, Giannone, Richard J, Dice, Lezlee, Yang, Zamin K, Engle, Nancy L, Tschaplinski, Timothy J, Hettich, Robert L, Brown, Steven D
Publicado 2012

Rhizosphere microbiomes diverge among Populus trichocarpa plant-host genotypes and chemotypes, but it depends on soil origin

por Veach, Allison M., Morris, Reese, Yip, Daniel Z., Yang, Zamin K., Engle, Nancy L., Cregger, Melissa A., Tschaplinski, Timothy J., Schadt, Christopher W.
Publicado en Microbiome (2019)

Plant Hosts Modify Belowground Microbial Community Response to Extreme Drought

por Veach, Allison M., Chen, Huaihai, Yang, Zamin K., Labbe, Audrey D., Engle, Nancy L., Tschaplinski, Timothy J., Schadt, Christopher W., Cregger, Melissa A.
Publicado en mSystems (2020)

Correction to: Rhizosphere microbiomes diverge among Populus trichocarpa plant-host genotypes and chemotypes, but it depends on soil origin

por Veach, Allison M., Morris, Reese, Yip, Daniel Z., Yang, Zamin K., Engle, Nancy L., Cregger, Melissa A., Tschaplinski, Timothy J., Schadt, Christopher W.
Publicado en Microbiome (2021)

Establishment and metabolic analysis of a model microbial community for understanding trophic and electron accepting interactions of subsurface anaerobic environments

por Miller, Lance D, Mosher, Jennifer J, Venkateswaran, Amudhan, Yang, Zamin K, Palumbo, Anthony V, Phelps, Tommy J, Podar, Mircea, Schadt, Christopher W, Keller, Martin
Publicado 2010

Host genetic and environmental effects on mouse intestinal microbiota

por Campbell, James H, Foster, Carmen M, Vishnivetskaya, Tatiana, Campbell, Alisha G, Yang, Zamin K, Wymore, Ann, Palumbo, Anthony V, Chesler, Elissa J, Podar, Mircea
Publicado 2012

Mathematical models of lignin biosynthesis

por Faraji, Mojdeh, Fonseca, Luis L., Escamilla-Treviño, Luis, Barros-Rios, Jaime, Engle, Nancy, Yang, Zamin K., Tschaplinski, Timothy J., Dixon, Richard A., Voit, Eberhard O.
Publicado en Biotechnol Biofuels (2018)

A Multifactor Analysis of Fungal and Bacterial Community Structure in the Root Microbiome of Mature Populus deltoides Trees

por Shakya, Migun, Gottel, Neil, Castro, Hector, Yang, Zamin K., Gunter, Lee, Labbé, Jessy, Muchero, Wellington, Bonito, Gregory, Vilgalys, Rytas, Tuskan, Gerald, Podar, Mircea, Schadt, Christopher W.
Publicado 2013

Microbial Community Stratification Linked to Utilization of Carbohydrates and Phosphorus Limitation in a Boreal Peatland at Marcell Experimental Forest, Minnesota, USA

por Lin, Xueju, Tfaily, Malak M., Steinweg, J. Megan, Chanton, Patrick, Esson, Kaitlin, Yang, Zamin K., Chanton, Jeffrey P., Cooper, William, Schadt, Christopher W., Kostka, Joel E.
Publicado 2014

A dynamic model of lignin biosynthesis in Brachypodium distachyon

por Faraji, Mojdeh, Fonseca, Luis L., Escamilla-Treviño, Luis, Barros-Rios, Jaime, Engle, Nancy L., Yang, Zamin K., Tschaplinski, Timothy J., Dixon, Richard A., Voit, Eberhard O.
Publicado en Biotechnol Biofuels (2018)

Scavenging organic nitrogen and remodelling lipid metabolism are key survival strategies adopted by the endophytic fungi, Serendipita vermifera and Serendipita bescii to alleviate...

por Ray, Prasun, Abraham, Paul E., Guo, Yingqing, Giannone, Richard J., Engle, Nancy L., Yang, Zamin K., Jacobson, Daniel, Hettich, Robert L., Tschaplinski, Timothy J., Craven, Kelly D.
Publicado en Environ Microbiol Rep (2019)

Characterization of Archaeal Community in Contaminated and Uncontaminated Surface Stream Sediments

por Porat, Iris, Vishnivetskaya, Tatiana A., Mosher, Jennifer J., Brandt, Craig C., Yang, Zamin K., Brooks, Scott C., Liang, Liyuan, Drake, Meghan M., Podar, Mircea, Brown, Steven D., Palumbo, Anthony V.
Publicado 2010