Dramatic changes in transcription factor binding over evolutionary time

di Weirauch, Matthew T, Hughes, Timothy R
Pubblicazione 2010

Quantifying Inter-Laboratory Variability in Stable Isotope Analysis of Ancient Skeletal Remains

di Pestle, William J., Crowley, Brooke E., Weirauch, Matthew T.
Pubblicazione 2014

Requirement for Dicer in maintenance of monosynaptic sensory-motor circuits in the spinal cord

di Imai, Fumiyasu, Chen, Xiaoting, Weirauch, Matthew T., Yoshida, Yutaka
Pubblicato in Cell Rep (2016)

CressInt: a user-friendly web resource for genome-scale exploration of gene regulation in Arabidopsis thaliana

di Chen, Xiaoting, Ernst, Kevin, Soman, Frances, Borowczak, Mike, Weirauch, Matthew T.
Pubblicato in Curr Plant Biol (2015)

Information-based methods for predicting gene function from systematic gene knock-downs

di Weirauch, Matthew T, Wong, Christopher K, Byrne, Alexandra B, Stuart, Joshua M
Pubblicazione 2008

Degenerate Pax2 and Senseless binding motifs improve detection of low-affinity sites required for enhancer specificity

di Zandvakili, Arya, Campbell, Ian, Gutzwiller, Lisa M., Weirauch, Matthew T., Gebelein, Brian
Pubblicato in PLoS Genet (2018)

A search engine to identify pathway genes from expression data on multiple organisms

di Chen, Chunnuan, Weirauch, Matthew T, Powell, Corey C, Zambon, Alexander C, Stuart, Joshua M
Pubblicazione 2007

GABPα Binding to Overlapping ETS and CRE DNA Motifs Is Enhanced by CREB1: Custom DNA Microarrays

di He, Ximiao, Syed, Khund Sayeed, Tillo, Desiree, Mann, Ishminder, Weirauch, Matthew T., Vinson, Charles
Pubblicato in G3 (Bethesda) (2015)

The Genetic Etiology of Eosinophilic Esophagitis

di Kottyan, Leah C., Parameswaran, Sreeja, Weirauch, Matthew T., Rothenberg, Marc E., Martin, Lisa J.
Pubblicato in J Allergy Clin Immunol (2020)

Affinity regression predicts the recognition code of nucleic acid binding proteins

di Pelossof, Raphael, Singh, Irtisha, Yang, Julie L., Weirauch, Matthew T., Hughes, Timothy R., Leslie, Christina S.
Pubblicato in Nat Biotechnol (2015)

Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay (EMSA) and DNA-affinity Precipitation Assay (DAPA)

di Miller, Daniel E., Patel, Zubin H., Lu, Xiaoming, Lynch, Arthur T., Weirauch, Matthew T., Kottyan, Leah C.
Pubblicato in J Vis Exp (2016)

PARP1 activation increases expression of modified tumor suppressors and pathways underlying development of aggressive hepatoblastoma

di Valanejad, Leila, Cast, Ashley, Wright, Mary, Bissig, Karl-Dimiter, Karns, Rebekah, Weirauch, Matthew T., Timchenko, Nikolai
Pubblicato in Commun Biol (2018)

AP-1 activity induced by co-stimulation is required for chromatin opening during T cell activation

di Yukawa, Masashi, Jagannathan, Sajjeev, Vallabh, Sushmitha, Kartashov, Andrey V., Chen, Xiaoting, Weirauch, Matthew T., Barski, Artem
Pubblicato in J Exp Med (2019)

Transcriptional Map of Respiratory Versatility in the Hyperthermophilic Crenarchaeon Pyrobaculum aerophilum

di Cozen, Aaron E., Weirauch, Matthew T., Pollard, Katherine S., Bernick, David L., Stuart, Joshua M., Lowe, Todd M.
Pubblicazione 2009

CG methylated microarrays identify a novel methylated sequence bound by the CEBPB|ATF4 heterodimer that is active in vivo

di Mann, Ishminder K., Chatterjee, Raghunath, Zhao, Jianfei, He, Ximiao, Weirauch, Matthew T., Hughes, Timothy R., Vinson, Charles
Pubblicazione 2013

Multiple layers of transcriptional regulation by PLZF in NKT-cell development

di Mao, Ai-Ping, Constantinides, Michael G., Mathew, Rebecca, Zuo, Zhixiang, Chen, Xiaoting, Weirauch, Matthew T., Bendelac, Albert
Pubblicato in Proc Natl Acad Sci U S A (2016)

Non-base-contacting residues enable kaleidoscopic evolution of metazoan C2H2 zinc finger DNA binding

di Najafabadi, Hamed S., Garton, Michael, Weirauch, Matthew T., Mnaimneh, Sanie, Yang, Ally, Kim, Philip M., Hughes, Timothy R.
Pubblicato in Genome Biol (2017)

Diesel exhaust and house dust mite allergen lead to common changes in the airway methylome and hydroxymethylome

di Zhang, Xue, Chen, Xiaoting, Weirauch, Matthew T, Zhang, Xiang, Burleson, J D, Brandt, Eric B, Ji, Hong
Pubblicato in Environ Epigenet (2018)

Human Virus Transcriptional Regulators

di Liu, Xing, Hong, Ted, Parameswaran, Sreeja, Ernst, Kevin, Marazzi, Ivan, Weirauch, Matthew T., Fuxman Bass, Juan I.
Pubblicato in Cell (2020)

Enrichment of genomic pathways based on differential DNA methylation associated with chronic postsurgical pain and anxiety in children – a prospective, pilot study

di Chidambaran, Vidya, Zhang, Xue, Geisler, Kristie, Stubbeman, Bobbie L, Chen, Xiaoting, Weirauch, Matthew T., Meller, Jarek, Ji, Hong
Pubblicato in J Pain (2019)