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Degenerate Pax2 and Senseless binding motifs improve detection of low-affinity sites required for enhancer specificity

Cells use thousands of regulatory sequences to recruit transcription factors (TFs) and produce specific transcriptional outcomes. Since TFs bind degenerate DNA sequences, discriminating functional TF binding sites (TFBSs) from background sequences represents a significant challenge. Here, we show th...

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Detalhes bibliográficos
Publicado no:PLoS Genet
Main Authors: Zandvakili, Arya, Campbell, Ian, Gutzwiller, Lisa M., Weirauch, Matthew T., Gebelein, Brian
Formato: Artigo
Idioma:Inglês
Publicado em: Public Library of Science 2018
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5902045/
https://ncbi.nlm.nih.gov/pubmed/29617378
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pgen.1007289
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