HLA predictions from the bronchoalveolar lavage fluid samples of five patients at the early stage of the wuhan seafood market COVID-19 outbreak

по Warren, René L., Birol, Inanç
Опубликовано в: ArXiv (2020)

HLA predictions from the bronchoalveolar lavage fluid and blood samples of eight COVID-19 patients at the pandemic onset

по Warren, René L, Birol, Inanç
Опубликовано в: Bioinformatics (2020)

Retrospective in silico HLA predictions from COVID-19 patients reveal alleles associated with disease prognosis

по Warren, René L., Birol, Inanç
Опубликовано в: medRxiv (2020)

Interactive SARS-COV-2 mutation timemaps

по Warren, René L., Birol, Inanç
Опубликовано в: ArXiv (2020)

Interactive SARS-CoV-2 mutation timemaps

по Warren, René L., Birol, Inanc
Опубликовано в: F1000Res (2021)

Targeted Assembly of Short Sequence Reads

по Warren, René L., Holt, Robert A.
Опубликовано 2011

Constructing large DNA segments by iterative clone recombination

по Smailus, Duane E., Warren, Rene L., Holt, Robert A.
Опубликовано 2008

NanoSim: nanopore sequence read simulator based on statistical characterization

по Yang, Chen, Chu, Justin, Warren, René L, Birol, Inanç
Опубликовано в: Gigascience (2017)

Innovations and challenges in detecting long read overlaps: an evaluation of the state-of-the-art

по Chu, Justin, Mohamadi, Hamid, Warren, René L, Yang, Chen, Birol, Inanç
Опубликовано в: Bioinformatics (2017)

ARCS: scaffolding genome drafts with linked reads

по Yeo, Sarah, Coombe, Lauren, Warren, René L, Chu, Justin, Birol, Inanç
Опубликовано в: Bioinformatics (2018)

ntJoin: Fast and lightweight assembly-guided scaffolding using minimizer graphs

по Coombe, Lauren, Nikolić, Vladimir, Chu, Justin, Birol, Inanc, Warren, René L
Опубликовано в: Bioinformatics (2020)

Assembling millions of short DNA sequences using SSAKE

по Warren, René L., Sutton, Granger G., Jones, Steven J. M., Holt, Robert A.
Опубликовано в: Bioinformatics (2007)

Kollector: transcript-informed, targeted de novo assembly of gene loci

по Kucuk, Erdi, Chu, Justin, Vandervalk, Benjamin P, Hammond, S Austin, Warren, René L, Birol, Inanc
Опубликовано в: Bioinformatics (2017)

Kollector: transcript-informed, targeted de novo assembly of gene loci

по Kucuk, Erdi, Chu, Justin, Vandervalk, Benjamin P, Austin Hammond, S, Warren, René L, Birol, Inanc
Опубликовано в: Bioinformatics (2017)

ChopStitch: exon annotation and splice graph construction using transcriptome assembly and whole genome sequencing data

по Khan, Hamza, Mohamadi, Hamid, Vandervalk, Benjamin P, Warren, Rene L, Chu, Justin, Birol, Inanc
Опубликовано в: Bioinformatics (2018)

Trans-NanoSim characterizes and simulates nanopore RNA-sequencing data

по Hafezqorani, Saber, Yang, Chen, Lo, Theodora, Nip, Ka Ming, Warren, René L, Birol, Inanc
Опубликовано в: Gigascience (2020)

Profiling the T-cell receptor beta-chain repertoire by massively parallel sequencing

по Freeman, J. Douglas, Warren, René L., Webb, John R., Nelson, Brad H., Holt, Robert A.
Опубликовано 2009

Sealer: a scalable gap-closing application for finishing draft genomes

по Paulino, Daniel, Warren, René L., Vandervalk, Benjamin P., Raymond, Anthony, Jackman, Shaun D., Birol, Inanç
Опубликовано в: BMC Bioinformatics (2015)

RNA-Bloom enables reference-free and reference-guided sequence assembly for single-cell transcriptomes

по Nip, Ka Ming, Chiu, Readman, Yang, Chen, Chu, Justin, Mohamadi, Hamid, Warren, René L., Birol, Inanc
Опубликовано в: Genome Res (2020)

Transcription of foreign DNA in Escherichia coli

по Warren, René L., Freeman, John D., Levesque, Roger C., Smailus, Duane E., Flibotte, Stephane, Holt, Robert A.
Опубликовано 2008