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ChopStitch: exon annotation and splice graph construction using transcriptome assembly and whole genome sequencing data

MOTIVATION: Sequencing studies on non-model organisms often interrogate both genomes and transcriptomes with massive amounts of short sequences. Such studies require de novo analysis tools and techniques, when the species and closely related species lack high quality reference resources. For certain...

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Detalhes bibliográficos
Publicado no:Bioinformatics
Main Authors: Khan, Hamza, Mohamadi, Hamid, Vandervalk, Benjamin P, Warren, Rene L, Chu, Justin, Birol, Inanc
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2018
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5946899/
https://ncbi.nlm.nih.gov/pubmed/29300846
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btx839
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