HLA predictions from the bronchoalveolar lavage fluid samples of five patients at the early stage of the wuhan seafood market COVID-19 outbreak

Por Warren, René L., Birol, Inanç
Publicado no ArXiv (2020)

HLA predictions from the bronchoalveolar lavage fluid and blood samples of eight COVID-19 patients at the pandemic onset

Por Warren, René L, Birol, Inanç
Publicado no Bioinformatics (2020)

Retrospective in silico HLA predictions from COVID-19 patients reveal alleles associated with disease prognosis

Por Warren, René L., Birol, Inanç
Publicado no medRxiv (2020)

Interactive SARS-COV-2 mutation timemaps

Por Warren, René L., Birol, Inanç
Publicado no ArXiv (2020)

Targeted Assembly of Short Sequence Reads

Por Warren, René L., Holt, Robert A.
Publicado em 2011

Constructing large DNA segments by iterative clone recombination

Por Smailus, Duane E., Warren, Rene L., Holt, Robert A.
Publicado em 2008

NanoSim: nanopore sequence read simulator based on statistical characterization

Por Yang, Chen, Chu, Justin, Warren, René L, Birol, Inanç
Publicado no Gigascience (2017)

Innovations and challenges in detecting long read overlaps: an evaluation of the state-of-the-art

Por Chu, Justin, Mohamadi, Hamid, Warren, René L, Yang, Chen, Birol, Inanç
Publicado no Bioinformatics (2017)

ARCS: scaffolding genome drafts with linked reads

Por Yeo, Sarah, Coombe, Lauren, Warren, René L, Chu, Justin, Birol, Inanç
Publicado no Bioinformatics (2018)

ntJoin: Fast and lightweight assembly-guided scaffolding using minimizer graphs

Por Coombe, Lauren, Nikolić, Vladimir, Chu, Justin, Birol, Inanc, Warren, René L
Publicado no Bioinformatics (2020)

Assembling millions of short DNA sequences using SSAKE

Por Warren, René L., Sutton, Granger G., Jones, Steven J. M., Holt, Robert A.
Publicado no Bioinformatics (2007)

Kollector: transcript-informed, targeted de novo assembly of gene loci

Por Kucuk, Erdi, Chu, Justin, Vandervalk, Benjamin P, Hammond, S Austin, Warren, René L, Birol, Inanc
Publicado no Bioinformatics (2017)

Kollector: transcript-informed, targeted de novo assembly of gene loci

Por Kucuk, Erdi, Chu, Justin, Vandervalk, Benjamin P, Austin Hammond, S, Warren, René L, Birol, Inanc
Publicado no Bioinformatics (2017)

ChopStitch: exon annotation and splice graph construction using transcriptome assembly and whole genome sequencing data

Por Khan, Hamza, Mohamadi, Hamid, Vandervalk, Benjamin P, Warren, Rene L, Chu, Justin, Birol, Inanc
Publicado no Bioinformatics (2018)

Trans-NanoSim characterizes and simulates nanopore RNA-sequencing data

Por Hafezqorani, Saber, Yang, Chen, Lo, Theodora, Nip, Ka Ming, Warren, René L, Birol, Inanc
Publicado no Gigascience (2020)

Profiling the T-cell receptor beta-chain repertoire by massively parallel sequencing

Por Freeman, J. Douglas, Warren, René L., Webb, John R., Nelson, Brad H., Holt, Robert A.
Publicado em 2009

Sealer: a scalable gap-closing application for finishing draft genomes

Por Paulino, Daniel, Warren, René L., Vandervalk, Benjamin P., Raymond, Anthony, Jackman, Shaun D., Birol, Inanç
Publicado no BMC Bioinformatics (2015)

RNA-Bloom enables reference-free and reference-guided sequence assembly for single-cell transcriptomes

Por Nip, Ka Ming, Chiu, Readman, Yang, Chen, Chu, Justin, Mohamadi, Hamid, Warren, René L., Birol, Inanc
Publicado no Genome Res (2020)

Transcription of foreign DNA in Escherichia coli

Por Warren, René L., Freeman, John D., Levesque, Roger C., Smailus, Duane E., Flibotte, Stephane, Holt, Robert A.
Publicado em 2008

Derivation of HLA types from shotgun sequence datasets

Por Warren, René L, Choe, Gina, Freeman, Douglas J, Castellarin, Mauro, Munro, Sarah, Moore, Richard, Holt, Robert A
Publicado em 2012