Transcription-dependent domain-scale three-dimensional genome organization in the dinoflagellate Breviolum minutum

od Marinov, Georgi K., Trevino, Alexandro E., Xiang, Tingting, Kundaje, Anshul, Grossman, Arthur R., Greenleaf, William J.
izdano v Nat Genet (2021)

Optical Control of Mammalian Endogenous Transcription and Epigenetic States

od Konermann, Silvana, Brigham, Mark D., Trevino, Alexandro, Hsu, Patrick D., Heidenreich, Matthias, Cong, Le, Platt, Randall J., Scott, David A., Church, George M., Zhang, Feng
Izdano 2013

Chromatin accessibility dynamics in a model of human forebrain development

od Trevino, Alexandro E., Sinnott-Armstrong, Nasa, Andersen, Jimena, Yoon, Se-Jin, Huber, Nina, Pritchard, Jonathan K., Chang, Howard Y., Greenleaf, William J., Pașca, Sergiu P.
izdano v Science (2020)

Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity

od Ran, F. Ann, Hsu, Patrick D., Lin, Chie-Yu, Gootenberg, Jonathan S., Konermann, Silvana, Trevino, Alexandro, Scott, David A., Inoue, Azusa, Matoba, Shogo, Zhang, Yi, Zhang, Feng
Izdano 2013

Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex

od Konermann, Silvana, Brigham, Mark D., Trevino, Alexandro E., Joung, Julia, Abudayyeh, Omar O., Barcena, Clea, Hsu, Patrick D., Habib, Naomi, Gootenberg, Jonathan S., Nishimasu, Hiroshi, Nureki, Osamu, Zhang, Feng
izdano v Nature (2014)

Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells

od Wu, Xuebing, Scott, David A., Kriz, Andrea J., Chiu, Anthony C., Hsu, Patrick D., Dadon, Daniel B., Cheng, Albert W., Trevino, Alexandro E., Konermann, Silvana, Chen, Sidi, Jaenisch, Rudolf, Zhang, Feng, Sharp, Phillip A.
Izdano 2014

Mitigation of off-target toxicity in CRISPR-Cas9 screens for essential non-coding elements

od Tycko, Josh, Wainberg, Michael, Marinov, Georgi K., Ursu, Oana, Hess, Gaelen T., Ego, Braeden K., Aradhana, Li, Amy, Truong, Alisa, Trevino, Alexandro E., Spees, Kaitlyn, Yao, David, Kaplow, Irene M., Greenside, Peyton G., Morgens, David W., Phanstiel, Douglas H., Snyder, Michael P., Bintu, Lacramioara, Greenleaf, William J., Kundaje, Anshul, Bassik, Michael C.
izdano v Nat Commun (2019)

An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues

od Corces, M Ryan, Trevino, Alexandro E, Hamilton, Emily G, Greenside, Peyton G, Sinnott-Armstrong, Nicholas A, Vesuna, Sam, Satpathy, Ansuman T, Rubin, Adam J, Montine, Kathleen S, Wu, Beijing, Kathiria, Arwa, Cho, Seung Woo, Mumbach, Maxwell R, Carter, Ava C, Kasowski, Maya, Orloff, Lisa A, Risca, Viviana I, Kundaje, Anshul, Khavari, Paul A, Montine, Thomas J, Greenleaf, William J, Chang, Howard Y
izdano v Nat Methods (2017)