Rapid Annotation of Anonymous Sequences from Genome Projects Using Semantic Similarities and a Weighting Scheme in Gene Ontology

gan Fontana, Paolo, Cestaro, Alessandro, Velasco, Riccardo, Formentin, Elide, Toppo, Stefano
Cyhoeddwyd 2009

Applications of Next-Generation Sequencing Technologies to Diagnostic Virology

gan Barzon, Luisa, Lavezzo, Enrico, Militello, Valentina, Toppo, Stefano, Palù, Giorgio
Cyhoeddwyd 2011

A two-step strategy for constructing specifically self-subtracted cDNA libraries

gan Laveder, Paolo, De Pittà, Cristiano, Toppo, Stefano, Valle, Giorgio, Lanfranchi, Gerolamo
Cyhoeddwyd 2002

Improving the quality of protein structure models by selecting from alignment alternatives

gan Sommer, Ingolf, Toppo, Stefano, Sander, Oliver, Lengauer, Thomas, Tosatto, Silvio CE
Cyhoeddwyd 2006

Evolutionary Study of the Crassphage Virus at Gene Level

gan Rossi, Alessandro, Treu, Laura, Toppo, Stefano, Zschach, Henrike, Campanaro, Stefano, Dutilh, Bas E.
Cyhoeddwyd yn Viruses (2020)

Eliciting the Functional Taxonomy from protein annotations and taxa

gan Falda, Marco, Lavezzo, Enrico, Fontana, Paolo, Bianco, Luca, Berselli, Michele, Formentin, Elide, Toppo, Stefano
Cyhoeddwyd yn Sci Rep (2016)

Studying Interactions by Molecular Dynamics Simulations at High Concentration

gan Fogolari, Federico, Corazza, Alessandra, Toppo, Stefano, Tosatto, Silvio C. E., Viglino, Paolo, Ursini, Fulvio, Esposito, Gennaro
Cyhoeddwyd 2012

Pathway Inspector: a pathway based web application for RNAseq analysis of model and non-model organisms

gan Bianco, Luca, Riccadonna, Samantha, Lavezzo, Enrico, Falda, Marco, Formentin, Elide, Cavalieri, Duccio, Toppo, Stefano, Fontana, Paolo
Cyhoeddwyd yn Bioinformatics (2017)

Antimicrobial Treatment and Containment Measures for an Extremely Drug-Resistant Klebsiella pneumoniae ST101 Isolate Carrying pKPN101-IT, a Novel Fully Sequenced bla(KPC-2) Plasmid

gan Frasson, Ilaria, Lavezzo, Enrico, Franchin, Elisa, Toppo, Stefano, Barzon, Luisa, Cavallaro, Antonietta, Richter, Sara N., Palù, Giorgio
Cyhoeddwyd 2012

Reducing bias in RNA sequencing data: a novel approach to compute counts

gan Finotello, Francesca, Lavezzo, Enrico, Bianco, Luca, Barzon, Luisa, Mazzon, Paolo, Fontana, Paolo, Toppo, Stefano, Di Camillo, Barbara
Cyhoeddwyd 2014

Mapping and characterization of G-quadruplexes in Mycobacterium tuberculosis gene promoter regions

gan Perrone, Rosalba, Lavezzo, Enrico, Riello, Erika, Manganelli, Riccardo, Palù, Giorgio, Toppo, Stefano, Provvedi, Roberta, Richter, Sara N.
Cyhoeddwyd yn Sci Rep (2017)

Development and production of an oligonucleotide MuscleChip: use for validation of ambiguous ESTs

gan Borup, Rehannah HA, Toppo, Stefano, Chen, Yi-Wen, Teslovich, Tanya M, Lanfranchi, Gerolamo, Valle, Giorgio, Hoffman, Eric P
Cyhoeddwyd 2002

Full Genome Sequence-Based Comparative Study of Wild-Type and Vaccine Strains of Infectious Laryngotracheitis Virus from Italy

gan Piccirillo, Alessandra, Lavezzo, Enrico, Niero, Giulia, Moreno, Ana, Massi, Paola, Franchin, Elisa, Toppo, Stefano, Salata, Cristiano, Palù, Giorgio
Cyhoeddwyd yn PLoS One (2016)

G-quadruplex forming sequences in the genome of all known human viruses: A comprehensive guide

gan Lavezzo, Enrico, Berselli, Michele, Frasson, Ilaria, Perrone, Rosalba, Palù, Giorgio, Brazzale, Alessandra R., Richter, Sara N., Toppo, Stefano
Cyhoeddwyd yn PLoS Comput Biol (2018)

Copper/Zinc Superoxide Dismutase from the Crocodile Icefish Chionodraco hamatus: Antioxidant Defense at Constant Sub-Zero Temperature

gan Chatzidimitriou, Evangelia, Bisaccia, Paola, Corrà, Francesca, Bonato, Marco, Irato, Paola, Manuto, Laura, Toppo, Stefano, Bakiu, Rigers, Santovito, Gianfranco
Cyhoeddwyd yn Antioxidants (Basel) (2020)

Argot2: a large scale function prediction tool relying on semantic similarity of weighted Gene Ontology terms

gan Falda Marco, Toppo Stefano, Pescarolo Alessandro, Lavezzo Enrico, Di Camillo Barbara, Facchinetti Andrea, Cilia Elisa, Velasco Riccardo, Fontana Paolo
Cyhoeddwyd 2012-03-01

Argot2: a large scale function prediction tool relying on semantic similarity of weighted Gene Ontology terms

gan Falda, Marco, Toppo, Stefano, Pescarolo, Alessandro, Lavezzo, Enrico, Di Camillo, Barbara, Facchinetti, Andrea, Cilia, Elisa, Velasco, Riccardo, Fontana, Paolo
Cyhoeddwyd 2012

Genomic comparative analysis and gene function prediction in infectious diseases: application to the investigation of a meningitis outbreak

gan Lavezzo, Enrico, Toppo, Stefano, Franchin, Elisa, Di Camillo, Barbara, Finotello, Francesca, Falda, Marco, Manganelli, Riccardo, Palù, Giorgio, Barzon, Luisa
Cyhoeddwyd yn BMC Infect Dis (2013)

Identification of novel X-linked gain-of-function RPGR-ORF15 mutation in Italian family with retinitis pigmentosa and pathologic myopia

gan Parmeggiani, Francesco, Barbaro, Vanessa, De Nadai, Katia, Lavezzo, Enrico, Toppo, Stefano, Chizzolini, Marzio, Palù, Giorgio, Parolin, Cristina, Di Iorio, Enzo
Cyhoeddwyd yn Sci Rep (2016)

Optimizing PCR primers targeting the bacterial 16S ribosomal RNA gene

gan Sambo, Francesco, Finotello, Francesca, Lavezzo, Enrico, Baruzzo, Giacomo, Masi, Giulia, Peta, Elektra, Falda, Marco, Toppo, Stefano, Barzon, Luisa, Di Camillo, Barbara
Cyhoeddwyd yn BMC Bioinformatics (2018)