Application of MM/PBSA colony free energy to loop decoy discrimination: Toward correlation between energy and root mean square deviation

von Fogolari, Federico, Tosatto, Silvio C.E.
Veröffentlicht 2005

INGA 2.0: improving protein function prediction for the dark proteome

von Piovesan, Damiano, Tosatto, Silvio C E
Veröffentlicht in Nucleic Acids Res (2019)

The RING 2.0 web server for high quality residue interaction networks

von Piovesan, Damiano, Minervini, Giovanni, Tosatto, Silvio C.E.
Veröffentlicht in Nucleic Acids Res (2016)

Large‐scale analysis of intrinsic disorder flavors and associated functions in the protein sequence universe

von Necci, Marco, Piovesan, Damiano, Tosatto, Silvio C. E.
Veröffentlicht in Protein Sci (2016)

Where differences resemble: sequence-feature analysis in curated databases of intrinsically disordered proteins

von Necci, Marco, Piovesan, Damiano, Tosatto, Silvio C E
Veröffentlicht in Database (Oxford) (2018)

SODA: prediction of protein solubility from disorder and aggregation propensity

von Paladin, Lisanna, Piovesan, Damiano, Tosatto, Silvio C. E.
Veröffentlicht in Nucleic Acids Res (2017)

The pVHL neglected functions, a tale of hypoxia-dependent and -independent regulations in cancer

von Minervini, Giovanni, Pennuto, Maria, Tosatto, Silvio C. E.
Veröffentlicht in Open Biol (2020)

Critical assessment of protein intrinsic disorder prediction

von Necci, Marco, Piovesan, Damiano, Tosatto, Silvio C. E.
Veröffentlicht in Nat Methods (2021)

Spritz: a server for the prediction of intrinsically disordered regions in protein sequences using kernel machines

von Vullo, Alessandro, Bortolami, Oscar, Pollastri, Gianluca, Tosatto, Silvio C. E.
Veröffentlicht 2006

PASTA 2.0: an improved server for protein aggregation prediction

von Walsh, Ian, Seno, Flavio, Tosatto, Silvio C.E., Trovato, Antonio
Veröffentlicht 2014

Dynamic scaffolds for neuronal signaling: in silico analysis of the TANC protein family

von Gasparini, Alessandra, Tosatto, Silvio C. E., Murgia, Alessandra, Leonardi, Emanuela
Veröffentlicht in Sci Rep (2017)

RepeatsDB-lite: a web server for unit annotation of tandem repeat proteins

von Hirsh, Layla, Paladin, Lisanna, Piovesan, Damiano, Tosatto, Silvio C E
Veröffentlicht in Nucleic Acids Res (2018)

Genotype-phenotype relations of the von Hippel-Lindau tumor suppressor inferred from a large-scale analysis of disease mutations and interactors

von Minervini, Giovanni, Quaglia, Federica, Tabaro, Francesco, Tosatto, Silvio C. E.
Veröffentlicht in PLoS Comput Biol (2019)

APICURON: a database to credit and acknowledge the work of biocurators

von Hatos, András, Quaglia, Federica, Piovesan, Damiano, Tosatto, Silvio C E
Veröffentlicht in Database (Oxford) (2021)

MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins

von Potenza, Emilio, Domenico, Tomás Di, Walsh, Ian, Tosatto, Silvio C.E.
Veröffentlicht in Nucleic Acids Res (2014)

REPETITA: detection and discrimination of the periodicity of protein solenoid repeats by discrete Fourier transform

von Marsella, Luca, Sirocco, Francesco, Trovato, Antonio, Seno, Flavio, Tosatto, Silvio C.E.
Veröffentlicht 2009

INGA: protein function prediction combining interaction networks, domain assignments and sequence similarity

von Piovesan, Damiano, Giollo, Manuel, Leonardi, Emanuela, Ferrari, Carlo, Tosatto, Silvio C.E.
Veröffentlicht in Nucleic Acids Res (2015)

“Protein” no longer means what it used to

von Parisi, Gustavo, Palopoli, Nicolas, Tosatto, Silvio C.E., Fornasari, María Silvina, Tompa, Peter
Veröffentlicht in Curr Res Struct Biol (2021)

A Computational Model of the LGI1 Protein Suggests a Common Binding Site for ADAM Proteins

von Leonardi, Emanuela, Andreazza, Simonetta, Vanin, Stefano, Busolin, Giorgia, Nobile, Carlo, Tosatto, Silvio C. E.
Veröffentlicht 2011

Design and Analysis of a Petri Net Model of the Von Hippel-Lindau (VHL) Tumor Suppressor Interaction Network

von Minervini, Giovanni, Panizzoni, Elisabetta, Giollo, Manuel, Masiero, Alessandro, Ferrari, Carlo, Tosatto, Silvio C. E.
Veröffentlicht 2014