The metagenomic data life-cycle: standards and best practices

Por ten Hoopen, Petra, Finn, Robert D., Bongo, Lars Ailo, Corre, Erwan, Fosso, Bruno, Meyer, Folker, Mitchell, Alex, Pelletier, Eric, Pesole, Graziano, Santamaria, Monica, Willassen, Nils Peder, Cochrane, Guy
Publicado no Gigascience (2017)

Marine microbial biodiversity, bioinformatics and biotechnology (M2B3) data reporting and service standards

Por ten Hoopen, Petra, Pesant, Stéphane, Kottmann, Renzo, Kopf, Anna, Bicak, Mesude, Claus, Simon, Deneudt, Klaas, Borremans, Catherine, Thijsse, Peter, Dekeyzer, Stefanie, Schaap, Dick MA, Bowler, Chris, Glöckner, Frank Oliver, Cochrane, Guy
Publicado no Stand Genomic Sci (2015)

Value, but high costs in post-deposition data curation

Por ten Hoopen, Petra, Amid, Clara, Luigi Buttigieg, Pier, Pafilis, Evangelos, Bravakos, Panos, Cerdeño-Tárraga, Ana M., Gibson, Richard, Kahlke, Tim, Legaki, Aglaia, Narayana Murthy, Kada, Papastefanou, Gabriella, Pereira, Emiliano, Rossello, Marc, Luisa Toribio, Ana, Cochrane, Guy
Publicado no Database (Oxford) (2016)

EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies

Por Mitchell, Alex L, Scheremetjew, Maxim, Denise, Hubert, Potter, Simon, Tarkowska, Aleksandra, Qureshi, Matloob, Salazar, Gustavo A, Pesseat, Sebastien, Boland, Miguel A, Hunter, Fiona M I, ten Hoopen, Petra, Alako, Blaise, Amid, Clara, Wilkinson, Darren J, Curtis, Thomas P, Cochrane, Guy, Finn, Robert D
Publicado no Nucleic Acids Res (2018)

The European Nucleotide Archive

Por Leinonen, Rasko, Akhtar, Ruth, Birney, Ewan, Bower, Lawrence, Cerdeno-Tárraga, Ana, Cheng, Ying, Cleland, Iain, Faruque, Nadeem, Goodgame, Neil, Gibson, Richard, Hoad, Gemma, Jang, Mikyung, Pakseresht, Nima, Plaister, Sheila, Radhakrishnan, Rajesh, Reddy, Kethi, Sobhany, Siamak, Ten Hoopen, Petra, Vaughan, Robert, Zalunin, Vadim, Cochrane, Guy
Publicado em 2011

Biocuration of functional annotation at the European nucleotide archive

Por Gibson, Richard, Alako, Blaise, Amid, Clara, Cerdeño-Tárraga, Ana, Cleland, Iain, Goodgame, Neil, ten Hoopen, Petra, Jayathilaka, Suran, Kay, Simon, Leinonen, Rasko, Liu, Xin, Pallreddy, Swapna, Pakseresht, Nima, Rajan, Jeena, Rosselló, Marc, Silvester, Nicole, Smirnov, Dmitriy, Toribio, Ana Luisa, Vaughan, Daniel, Zalunin, Vadim, Cochrane, Guy
Publicado no Nucleic Acids Res (2016)

Content discovery and retrieval services at the European Nucleotide Archive

Por Silvester, Nicole, Alako, Blaise, Amid, Clara, Cerdeño-Tárraga, Ana, Cleland, Iain, Gibson, Richard, Goodgame, Neil, ten Hoopen, Petra, Kay, Simon, Leinonen, Rasko, Li, Weizhong, Liu, Xin, Lopez, Rodrigo, Pakseresht, Nima, Pallreddy, Swapna, Plaister, Sheila, Radhakrishnan, Rajesh, Rossello, Marc, Senf, Alexander, Smirnov, Dmitriy, Toribio, Ana Luisa, Vaughan, Daniel, Zalunin, Vadim, Cochrane, Guy
Publicado no Nucleic Acids Res (2014)

European Nucleotide Archive in 2016

Por Toribio, Ana Luisa, Alako, Blaise, Amid, Clara, Cerdeño-Tarrága, Ana, Clarke, Laura, Cleland, Iain, Fairley, Susan, Gibson, Richard, Goodgame, Neil, ten Hoopen, Petra, Jayathilaka, Suran, Kay, Simon, Leinonen, Rasko, Liu, Xin, Martínez-Villacorta, Josué, Pakseresht, Nima, Rajan, Jeena, Reddy, Kethi, Rosello, Marc, Silvester, Nicole, Smirnov, Dmitriy, Vaughan, Daniel, Zalunin, Vadim, Cochrane, Guy
Publicado no Nucleic Acids Res (2017)

Major submissions tool developments at the European nucleotide archive

Por Amid, Clara, Birney, Ewan, Bower, Lawrence, Cerdeño-Tárraga, Ana, Cheng, Ying, Cleland, Iain, Faruque, Nadeem, Gibson, Richard, Goodgame, Neil, Hunter, Christopher, Jang, Mikyung, Leinonen, Rasko, Liu, Xin, Oisel, Arnaud, Pakseresht, Nima, Plaister, Sheila, Radhakrishnan, Rajesh, Reddy, Kethi, Rivière, Stephane, Rossello, Marc, Senf, Alexander, Smirnov, Dimitriy, Ten Hoopen, Petra, Vaughan, Daniel, Vaughan, Robert, Zalunin, Vadim, Cochrane, Guy
Publicado em 2012

Improvements to services at the European Nucleotide Archive

Por Leinonen, Rasko, Akhtar, Ruth, Birney, Ewan, Bonfield, James, Bower, Lawrence, Corbett, Matt, Cheng, Ying, Demiralp, Fehmi, Faruque, Nadeem, Goodgame, Neil, Gibson, Richard, Hoad, Gemma, Hunter, Christopher, Jang, Mikyung, Leonard, Steven, Lin, Quan, Lopez, Rodrigo, Maguire, Michael, McWilliam, Hamish, Plaister, Sheila, Radhakrishnan, Rajesh, Sobhany, Siamak, Slater, Guy, Ten Hoopen, Petra, Valentin, Franck, Vaughan, Robert, Zalunin, Vadim, Zerbino, Daniel, Cochrane, Guy
Publicado em 2010

Facing growth in the European Nucleotide Archive

Por Cochrane, Guy, Alako, Blaise, Amid, Clara, Bower, Lawrence, Cerdeño-Tárraga, Ana, Cleland, Iain, Gibson, Richard, Goodgame, Neil, Jang, Mikyung, Kay, Simon, Leinonen, Rasko, Lin, Xiu, Lopez, Rodrigo, McWilliam, Hamish, Oisel, Arnaud, Pakseresht, Nima, Pallreddy, Swapna, Park, Youngmi, Plaister, Sheila, Radhakrishnan, Rajesh, Rivière, Stephane, Rossello, Marc, Senf, Alexander, Silvester, Nicole, Smirnov, Dmitriy, ten Hoopen, Petra, Toribio, Ana, Vaughan, Daniel, Zalunin, Vadim
Publicado em 2013

The ocean sampling day consortium

Por Kopf, Anna, Bicak, Mesude, Kottmann, Renzo, Schnetzer, Julia, Kostadinov, Ivaylo, Lehmann, Katja, Fernandez-Guerra, Antonio, Jeanthon, Christian, Rahav, Eyal, Ullrich, Matthias, Wichels, Antje, Gerdts, Gunnar, Polymenakou, Paraskevi, Kotoulas, Giorgos, Siam, Rania, Abdallah, Rehab Z, Sonnenschein, Eva C, Cariou, Thierry, O’Gara, Fergal, Jackson, Stephen, Orlic, Sandi, Steinke, Michael, Busch, Julia, Duarte, Bernardo, Caçador, Isabel, Canning-Clode, João, Bobrova, Oleksandra, Marteinsson, Viggo, Reynisson, Eyjolfur, Loureiro, Clara Magalhães, Luna, Gian Marco, Quero, Grazia Marina, Löscher, Carolin R, Kremp, Anke, DeLorenzo, Marie E, Øvreås, Lise, Tolman, Jennifer, LaRoche, Julie, Penna, Antonella, Frischer, Marc, Davis, Timothy, Katherine, Barker, Meyer, Christopher P, Ramos, Sandra, Magalhães, Catarina, Jude-Lemeilleur, Florence, Aguirre-Macedo, Ma Leopoldina, Wang, Shiao, Poulton, Nicole, Jones, Scott, Collin, Rachel, Fuhrman, Jed A, Conan, Pascal, Alonso, Cecilia, Stambler, Noga, Goodwin, Kelly, Yakimov, Michael M, Baltar, Federico, Bodrossy, Levente, Van De Kamp, Jodie, Frampton, Dion MF, Ostrowski, Martin, Van Ruth, Paul, Malthouse, Paul, Claus, Simon, Deneudt, Klaas, Mortelmans, Jonas, Pitois, Sophie, Wallom, David, Salter, Ian, Costa, Rodrigo, Schroeder, Declan C, Kandil, Mahrous M, Amaral, Valentina, Biancalana, Florencia, Santana, Rafael, Pedrotti, Maria Luiza, Yoshida, Takashi, Ogata, Hiroyuki, Ingleton, Tim, Munnik, Kate, Rodriguez-Ezpeleta, Naiara, Berteaux-Lecellier, Veronique, Wecker, Patricia, Cancio, Ibon, Vaulot, Daniel, Bienhold, Christina, Ghazal, Hassan, Chaouni, Bouchra, Essayeh, Soumya, Ettamimi, Sara, Zaid, El Houcine, Boukhatem, Noureddine, Bouali, Abderrahim, Chahboune, Rajaa, Barrijal, Said, Timinouni, Mohammed, El Otmani, Fatima, Bennani, Mohamed, Mea, Marianna, Todorova, Nadezhda, Karamfilov, Ventzislav, ten Hoopen, Petra, Cochrane, Guy, L’Haridon, Stephane, Bizsel, Kemal Can, Vezzi, Alessandro, Lauro, Federico M, Martin, Patrick, Jensen, Rachelle M, Hinks, Jamie, Gebbels, Susan, Rosselli, Riccardo, De Pascale, Fabio, Schiavon, Riccardo, dos Santos, Antonina, Villar, Emilie, Pesant, Stéphane, Cataletto, Bruno, Malfatti, Francesca, Edirisinghe, Ranjith, Silveira, Jorge A Herrera, Barbier, Michele, Turk, Valentina, Tinta, Tinkara, Fuller, Wayne J, Salihoglu, Ilkay, Serakinci, Nedime, Ergoren, Mahmut Cerkez, Bresnan, Eileen, Iriberri, Juan, Nyhus, Paul Anders Fronth, Bente, Edvardsen, Karlsen, Hans Erik, Golyshin, Peter N, Gasol, Josep M, Moncheva, Snejana, Dzhembekova, Nina, Johnson, Zackary, Sinigalliano, Christopher David, Gidley, Maribeth Louise, Zingone, Adriana, Danovaro, Roberto, Tsiamis, George, Clark, Melody S, Costa, Ana Cristina, El Bour, Monia, Martins, Ana M, Collins, R Eric, Ducluzeau, Anne-Lise, Martinez, Jonathan, Costello, Mark J, Amaral-Zettler, Linda A, Gilbert, Jack A, Davies, Neil, Field, Dawn, Glöckner, Frank Oliver
Publicado no Gigascience (2015)