Space, time and microdiversity: towards a resolution revolution in microbiomics

per Paoli, Lucas, Sunagawa, Shinichi
Publicat a Environ Microbiol Rep (2020)

Threatened Corals Provide Underexplored Microbial Habitats

per Sunagawa, Shinichi, Woodley, Cheryl M., Medina, Mónica
Publicat 2010

Computational eco-systems biology in Tara Oceans: translating data into knowledge

per Sunagawa, Shinichi, Karsenti, Eric, Bowler, Chris, Bork, Peer
Publicat a Mol Syst Biol (2015)

RNase H As Gene Modifier, Driver of Evolution and Antiviral Defense

per Moelling, Karin, Broecker, Felix, Russo, Giancarlo, Sunagawa, Shinichi
Publicat a Front Microbiol (2017)

Hyperthermic stress-induced increase in the expression of glutamate-cysteine ligase and glutathione levels in the symbiotic sea anemone Aiptasia pallida

per Sunagawa, Shinichi, Choi, Jinah, Forman, Henry Jay, Medina, Mónica
Publicat 2008

Inter-individual differences in the gene content of human gut bacterial species

per Zhu, Ana, Sunagawa, Shinichi, Mende, Daniel R, Bork, Peer
Publicat a Genome Biol (2015)

Gonadal transcriptomics elucidate patterns of adaptive evolution within marine rockfishes (Sebastes)

per Heras, Joseph, McClintock, Kelly, Sunagawa, Shinichi, Aguilar, Andres
Publicat a BMC Genomics (2015)

Identification and Gene Expression Analysis of a Taxonomically Restricted Cysteine-Rich Protein Family in Reef-Building Corals

per Sunagawa, Shinichi, DeSalvo, Michael K., Voolstra, Christian R., Reyes-Bermudez, Alejandro, Medina, Mónica
Publicat 2009

metaSNV: A tool for metagenomic strain level analysis

per Costea, Paul Igor, Munch, Robin, Coelho, Luis Pedro, Paoli, Lucas, Sunagawa, Shinichi, Bork, Peer
Publicat a PLoS One (2017)

Consistent host and organ occupancy of phyllosphere bacteria in a community of wild herbaceous plant species

per Massoni, Julien, Bortfeld-Miller, Miriam, Jardillier, Ludwig, Salazar, Guillem, Sunagawa, Shinichi, Vorholt, Julia A.
Publicat a ISME J (2019)

Country-specific antibiotic use practices impact the human gut resistome

per Forslund, Kristoffer, Sunagawa, Shinichi, Kultima, Jens Roat, Mende, Daniel R., Arumugam, Manimozhiyan, Typas, Athanasios, Bork, Peer
Publicat 2013

Global genetic capacity for mixotrophy in marine picocyanobacteria

per Yelton, Alexis P, Acinas, Silvia G, Sunagawa, Shinichi, Bork, Peer, Pedrós-Alió, Carlos, Chisholm, Sallie W
Publicat a ISME J (2016)

proGenomes: a resource for consistent functional and taxonomic annotations of prokaryotic genomes

per Mende, Daniel R., Letunic, Ivica, Huerta-Cepas, Jaime, Li, Simone S., Forslund, Kristoffer, Sunagawa, Shinichi, Bork, Peer
Publicat a Nucleic Acids Res (2017)

Gut microbial beta-glucuronidase and glycerol/diol dehydratase activity contribute to dietary heterocyclic amine biotransformation

per Zhang, Jianbo, Lacroix, Christophe, Wortmann, Esther, Ruscheweyh, Hans-Joachim, Sunagawa, Shinichi, Sturla, Shana J., Schwab, Clarissa
Publicat a BMC Microbiol (2019)

Synthetic microbiota reveal priority effects and keystone strains in the Arabidopsis phyllosphere

per Carlström, Charlotte I., Field, Christopher M., Bortfeld-Miller, Miriam, Müller, Barbara, Sunagawa, Shinichi, Vorholt, Julia A.
Publicat a Nat Ecol Evol (2019)

The Porcelain Crab Transcriptome and PCAD, the Porcelain Crab Microarray and Sequence Database

per Tagmount, Abderrahmane, Wang, Mei, Lindquist, Erika, Tanaka, Yoshihiro, Teranishi, Kristen S., Sunagawa, Shinichi, Wong, Mike, Stillman, Jonathon H.
Publicat 2010

Classification and quantification of bacteriophage taxa in human gut metagenomes

per Waller, Alison S, Yamada, Takuji, Kristensen, David M, Kultima, Jens Roat, Sunagawa, Shinichi, Koonin, Eugene V, Bork, Peer
Publicat 2014

Classification and quantification of bacteriophage taxa in human gut metagenomes

per Waller, Alison S, Yamada, Takuji, Kristensen, David M, Kultima, Jens Roat, Sunagawa, Shinichi, Koonin, Eugene V, Bork, Peer
Publicat 2014

Temporal and technical variability of human gut metagenomes

per Voigt, Anita Y, Costea, Paul I, Kultima, Jens Roat, Li, Simone S, Zeller, Georg, Sunagawa, Shinichi, Bork, Peer
Publicat a Genome Biol (2015)

Quantitative 3D-imaging for cell biology and ecology of environmental microbial eukaryotes

per Colin, Sebastien, Coelho, Luis Pedro, Sunagawa, Shinichi, Bowler, Chris, Karsenti, Eric, Bork, Peer, Pepperkok, Rainer, de Vargas, Colomban
Publicat a eLife (2017)