High-throughput computational structure-based characterization of protein families: START domains and implications for structural genomics

Tekijä Lee, Hunjoong, Li, Zhaohui, Silkov, Antonina, Fischer, Markus, Petrey, Donald, Honig, Barry, Murray, Diana
Julkaistu 2010

Genome-wide Structural Analysis Reveals Novel Membrane Binding Properties of AP180 N-terminal Homology (ANTH) Domains

Tekijä Silkov, Antonina, Yoon, Youngdae, Lee, Hunjoong, Gokhale, Nikhil, Adu-Gyamfi, Emmanuel, Stahelin, Robert V., Cho, Wonhwa, Murray, Diana
Julkaistu 2011

Template-based Prediction of Protein Function

Tekijä Petrey, Donald, Chen, T. Scott, Deng, Lei, Garzon, Jose Ignacio, Hwang, Howook, Lasso, Gorka, Lee, Hunjoong, Silkov, Antonina, Honig, Barry
Julkaisussa Curr Opin Struct Biol (2015)

p21-activated Kinases (PAKs) Mediate the Phosphorylation of PREX2 Protein to Initiate Feedback Inhibition of Rac1 GTPase

Tekijä Barrows, Douglas, Schoenfeld, Sarah M., Hodakoski, Cindy, Silkov, Antonina, Honig, Barry, Couvillon, Anthony, Shymanets, Aliaksei, Nürnberg, Bernd, Asara, John M., Parsons, Ramon
Julkaisussa J Biol Chem (2015)

Genome-Wide Identification and Functional Annotation of Dual Specificity Protein- and Lipid-Binding Modules That Modulate Protein Interactions at the Membrane

Tekijä Chen, Yong, Sheng, Ren, Kallberg, Morten, Silkov, Antonina, Tun, Moe P., Bhardwaj, Nitin, Kurilova, Svetlana, Hall, Randy A., Honig, Barry, Lu, Hui, Cho, Wonhwa
Julkaistu 2012

Chloroplast targeting factor AKR2 evolved from an ankyrin repeat domain coincidentally binds two chloroplast lipids

Tekijä Kim, Dae Heon, Park, Mi-Jeong, Gwon, Gwang Hyeon, Silkov, Antonina, Xu, Zheng-Yi, Yang, Eun Chan, Song, Seohyeon, Song, Kyungyoung, Kim, Younghyun, Yoon, Hwan Su, Honig, Barry, Cho, Wonhwa, Cho, Yunje, Hwang, Inhwan
Julkaistu 2014

Lipids Regulate Lck Protein Activity through Their Interactions with the Lck Src Homology 2 Domain

Tekijä Sheng, Ren, Jung, Da-Jung, Silkov, Antonina, Kim, Hyunjin, Singaram, Indira, Wang, Zhi-Gang, Xin, Yao, Kim, Eui, Park, Mi-Jeong, Thiagarajan-Rosenkranz, Pallavi, Smrt, Sean, Honig, Barry, Baek, Kwanghee, Ryu, Sungho, Lorieau, Justin, Kim, You-Me, Cho, Wonhwa
Julkaisussa J Biol Chem (2016)

SH2 domains serve as lipid binding modules for pTyr-signaling proteins

Tekijä Park, Mi-Jeong, Sheng, Ren, Silkov, Antonina, Jung, Da-Jung, Wang, Zhi-Gang, Xin, Yao, Kim, Hyunjin, Thiagarajan-Rosenkranz, Pallavi, Song, Seohyeon, Yoon, Youngdae, Nam, Wonhee, Kim, Ilshin, Kim, Eui, Lee, Dong-Gyu, Chen, Yong, Singaram, Indira, Wang, Li, Jang, Myoung Ho, Hwang, Cheol-Sang, Honig, Barry, Ryu, Sungho, Lorieau, Justin, Kim, You-Me, Cho, Wonhwa
Julkaisussa Mol Cell (2016)

Resolving medulloblastoma cellular architecture by single-cell genomics

Tekijä Hovestadt, Volker, Smith, Kyle S., Bihannic, Laure, Filbin, Mariella G., Shaw, McKenzie L., Baumgartner, Alicia, DeWitt, John C., Groves, Andrew, Mayr, Lisa, Weisman, Hannah R., Richman, Alyssa R., Shore, Marni E., Goumnerova, Liliana, Rosencrance, Celeste, Carter, Robert A., Phoenix, Timothy N., Hadley, Jennifer L., Tong, Yiai, Houston, Jim, Ashmun, Richard A., DeCuypere, Michael, Sharma, Tanvi, Flasch, Diane, Silkov, Antonina, Ligon, Keith, Pomeroy, Scott L., Rivera, Miguel N., Rozenblatt-Rosen, Orit, Rusert, Jessica M., Wechsler-Reya, Robert J., Li, Xiao-Nan, Peyrl, Andreas, Gojo, Johannes, Kirchhofer, Dominik, Lötsch, Daniela, Czech, Thomas, Dorfer, Christian, Haberler, Christine, Geyeregger, Rene, Halfmann, Angela, Gawad, Charles, Easton, John, Pfister, Stefan M., Regev, Aviv, Gajjar, Amar, Orr, Brent A., Slavc, Irene, Robinson, Giles W., Bernstein, Bradley E., Suvà, Mario L., Northcott, Paul A.
Julkaisussa Nature (2019)