INTEGRATE: gene fusion discovery using whole genome and transcriptome data

Por Zhang, Jin, White, Nicole M., Schmidt, Heather K., Fulton, Robert S., Tomlinson, Chad, Warren, Wesley C., Wilson, Richard K., Maher, Christopher A.
Publicado no Genome Res (2016)

BreakTrans: uncovering the genomic architecture of gene fusions

Por Chen, Ken, Navin, Nicholas E, Wang, Yong, Schmidt, Heather K, Wallis, John W, Niu, Beifang, Fan, Xian, Zhao, Hao, McLellan, Michael D, Hoadley, Katherine A, Mardis, Elaine R, Ley, Timothy J, Perou, Charles M, Wilson, Richard K, Ding, Li
Publicado em 2013

Age-related cancer mutations associated with clonal hematopoietic expansion

Por Xie, Mingchao, Lu, Charles, Wang, Jiayin, McLellan, Michael D., Johnson, Kimberly J., Wendl, Michael C., McMichael, Joshua F., Schmidt, Heather K., Yellapantula, Venkata, Miller, Christopher A., Ozenberger, Bradley A., Welch, John S., Link, Daniel C., Walter, Matthew J., Mardis, Elaine R., Dipersio, John F., Chen, Feng, Wilson, Richard K., Ley, Timothy J., Ding, Li
Publicado no Nat Med (2014)

Integrated Analysis of Germline and Somatic Variants in Ovarian Cancer

Por Kanchi, Krishna L., Johnson, Kimberly J., Lu, Charles, McLellan, Michael D., Leiserson, Mark D.M., Wendl, Michael C., Zhang, Qunyuan, Koboldt, Daniel C., Xie, Mingchao, Kandoth, Cyriac, McMichael, Joshua F., Wyczalkowski, Matthew A., Larson, David E., Schmidt, Heather K., Miller, Christopher A., Fulton, Robert S., Spellman, Paul T., Mardis, Elaine R., Druley, Todd E., Graubert, Timothy A., Goodfellow, Paul J., Raphael, Benjamin J., Wilson, Richard K., Ding, Li
Publicado em 2014

Identification of a CpG Island Methylator Phenotype that Defines a Distinct Subgroup of Glioma

Por Noushmehr, Houtan, Weisenberger, Daniel J., Diefes, Kristin, Phillips, Heidi S., Pujara, Kanan, Berman, Benjamin P., Pan, Fei, Pelloski, Christopher E., Sulman, Erik P., Bhat, Krishna P., Verhaak, Roel G.W., Hoadley, Katherine A., Hayes, D. Neil, Perou, Charles M., Schmidt, Heather K., Ding, Li, Wilson, Richard K., Van Den Berg, David, Shen, Hui, Bengtsson, Henrik, Neuvial, Pierre, Cope, Leslie M., Buckley, Jonathan, Herman, James G., Baylin, Stephen B., Laird, Peter W., Aldape, Kenneth
Publicado em 2010

Patterns and functional implications of rare germline variants across 12 cancer types

Por Lu, Charles, Xie, Mingchao, Wendl, Michael C., Wang, Jiayin, McLellan, Michael D., Leiserson, Mark D. M., Huang, Kuan-lin, Wyczalkowski, Matthew A., Jayasinghe, Reyka, Banerjee, Tapahsama, Ning, Jie, Tripathi, Piyush, Zhang, Qunyuan, Niu, Beifang, Ye, Kai, Schmidt, Heather K., Fulton, Robert S., McMichael, Joshua F., Batra, Prag, Kandoth, Cyriac, Bharadwaj, Maheetha, Koboldt, Daniel C., Miller, Christopher A., Kanchi, Krishna L., Eldred, James M., Larson, David E., Welch, John S., You, Ming, Ozenberger, Bradley A., Govindan, Ramaswamy, Walter, Matthew J., Ellis, Matthew J., Mardis, Elaine R., Graubert, Timothy A., Dipersio, John F., Ley, Timothy J., Wilson, Richard K., Goodfellow, Paul J., Raphael, Benjamin J., Chen, Feng, Johnson, Kimberly J., Parvin, Jeffrey D., Ding, Li
Publicado no Nat Commun (2015)

The origin and evolution of mutations in Acute Myeloid Leukemia

Por Welch, John S., Ley, Timothy J., Link, Daniel C., Miller, Christopher A., Larson, David E., Koboldt, Daniel C., Wartman, Lukas D., Lamprecht, Tamara L., Liu, Fulu, Xia, Jun, Kandoth, Cyriac, Fulton, Robert S., McLellan, Michael D., Dooling, David J., Wallis, John W., Chen, Ken, Harris, Christopher C., Schmidt, Heather K., Kalicki-Veizer, Joelle M., Lu, Charles, Zhang, Qunyuan, Lin, Ling, O’Laughlin, Michelle D., McMichael, Joshua F., Delehaunty, Kim D., Fulton, Lucinda A., Magrini, Vincent J., McGrath, Sean D., Demeter, Ryan T., Vickery, Tammi L., Hundal, Jasreet, Cook, Lisa L., Swift, Gary W., Reed, Jerry P., Alldredge, Patricia A., Wylie, Todd N., Walker, Jason R., Watson, Mark A., Heath, Sharon E., Shannon, William D., Varghese, Nobish, Nagarajan, Rakesh, Payton, Jacqueline E., Baty, Jack D., Kulkarni, Shashikant, Klco, Jeffery M., Tomasson, Michael H., Westervelt, Peter, Walter, Matthew J., Graubert, Timothy A., DiPersio, John F., Ding, Li, Mardis, Elaine R., Wilson, Richard K.
Publicado em 2012