Phenotypes from cell-free DNA

Por Zukowski, Alexis, Rao, Satyanarayan, Ramachandran, Srinivas
Publicado no Open Biol (2020)

Cooperative Binding between Distant Transcription Factors is a Hallmark of Active Enhancers

Por Rao, Satyanarayan, Ahmad, Kami, Ramachandran, Srinivas
Publicado no Mol Cell (2021)

Genome-wide prediction of minor-groove electrostatic potential enables biophysical modeling of protein–DNA binding

Por Chiu, Tsu-Pei, Rao, Satyanarayan, Mann, Richard S., Honig, Barry, Rohs, Remo
Publicado no Nucleic Acids Res (2017)

Systematic prediction of DNA shape changes due to CpG methylation explains epigenetic effects on protein–DNA binding

Por Rao, Satyanarayan, Chiu, Tsu-Pei, Kribelbauer, Judith F., Mann, Richard S., Bussemaker, Harmen J., Rohs, Remo
Publicado no Epigenetics Chromatin (2018)

Evolving insights on how cytosine methylation affects protein–DNA binding

Por Dantas Machado, Ana Carolina, Zhou, Tianyin, Rao, Satyanarayan, Goel, Pragya, Rastogi, Chaitanya, Lazarovici, Allan, Bussemaker, Harmen J., Rohs, Remo
Publicado no Brief Funct Genomics (2015)

RNA polymerase alpha subunit recognizes the DNA shape of the Upstream Promoter element

Por Lara-Gonzalez, Samuel, Machado, Ana Carolina Dantas, Rao, Satyanarayan, Napoli, Andrew A., Birktoft, Jens, Di Felice, Rosa, Rohs, Remo, Lawson, Catherine L.
Publicado no Biochemistry (2020)